Gene Bamb_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0334 
Symbol 
ID4309994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp380325 
End bp380888 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID638148122 
Producthypothetical protein 
Protein accessionYP_772228 
Protein GI115350389 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTGCTCTCGA CTTCTGGGTC GGCCTGTTCG TGGTGGTGGG CTTCCTTGCG 
GTGCTGTTCC TGGCGCTCAA GGTCGGCAAC ATGAGCTCGC TGTCCTTTCA GCCGACCTAC 
TCGGTGCGGA TGAAATTCGA CAACATCGGC GGGCTGAAGC CGCGCGCGGC CGTGAAGAGC 
GCCGGCGTCG TGGTCGGCCG CGTGAAGGCG ATCGGCTTCG ACAGCAATAC GTATCAGGCG 
CTCGTGACGA TCGACGTCGA CGGCCAATAC CCGTTCCCGA AGGATTCGTC GGCGAAGATC 
CTGACGTCCG GCCTGCTCGG CGAGCAGTAC ATCGGCCTCG ATCCGGGCGG TGACACCGAA 
ATGCTGAAGT CGGGCGATAC GATCACGATG ACGCAGTCGG CGATCGTGCT CGAGAATCTG 
ATCGGCCAGT TCCTGTACAG CAAGGCGGCC GACGCGGGCG GCGCGAAGCC GGCATCCGGC 
GCACCGGCAG CACCGGCAGC ACCGGCCGCG CCCGCACCGG TCGCGGTGCC GGCGTCCGCG 
GTGGCCGGCT CGGCCGCCCA ATAA
 
Protein sequence
MKKTALDFWV GLFVVVGFLA VLFLALKVGN MSSLSFQPTY SVRMKFDNIG GLKPRAAVKS 
AGVVVGRVKA IGFDSNTYQA LVTIDVDGQY PFPKDSSAKI LTSGLLGEQY IGLDPGGDTE 
MLKSGDTITM TQSAIVLENL IGQFLYSKAA DAGGAKPASG APAAPAAPAA PAPVAVPASA 
VAGSAAQ