| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0328 |
|---|
| Symbol | |
|---|
| ID | 4309988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 375283 |
|---|
| End bp | 376419 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638148116 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_772222 |
|---|
| Protein GI | 115350383 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCC ACGCTTCCCG GCCGGATTTC GCGGTGCTAG GCGGCGGCCT CGTCGGCCGG
CTGATCGCCT GGCGGCTCGC GGGCGACGGG CATCGCGTCG CGCTGTACGA GCGCGGCGGC
CCGGACGGCG AGCAATCGGC CGCGTGGATC GCGGCCGCGA TGCTTGCGCC GCTCGCCGAG
GCGGCGAGCG CCGAACTGCT GATCACCGAG CTCGGCGCCG CGTCGCTCGC GCGCTGGCCG
CAATGGCTCG CGGAGCTGCC CGAACCGGTG TTCTTCCAGC ATCACGGCAC GCTCGTCGTC
TGGCATCACG CGGATCGGGC GGAGGCGCCG CTGTTCGAGC GGCGCGTGCG CGCGAACGCG
CCGGCCGAGC TGTTCGACGG CGGCTTCGTC ACGCTGGCCG GCGCGCAGGT CGACGCGGCC
GAGCCCGCGC TCGCGGGGCG CTTCGCGCGC GGCCTGCTGC TGCCGCGCGA AGGGCAGCTC
GATAATCGTC AGGCGCTGCG CGCGCTGGCG GCGGGCCTCG CGCAGCGCGG CGTCGAGCTG
CACTGGCACG CGACGATCGA CGACGCGAAC CGGCCCGACG CACATTTCAC GATCGATTGC
CGCGGTCTCG GCGCGAAAGC CGCGCTGCCC GCGCTGCGCG GCATCCGCGG CGAAGTCGCG
CGGGTGCACG CGCCGGGCAT CGGGCTCACG CGGCCCGTGC GGCTGTTGCA TCCGCGCTAT
CCGCTGTACA TCGCGCCGAA GCAGGACGAC CTGTACGTGA TCGGCGCAAC CGAGGTGGAG
GGCGAGGACA TGTCGCCCGT CAGCGTGCGC TCCGCGCTCG AACTGCTGAG CGCGGCGTTC
TCCGTGCACC CGGCGTTCGG CGAGGCGCGC ATCCTCGAAC TGAATGCGCA GTGCCGCCCG
ACGCTGCCCG ACCACCGCCC GGCGGTGATC TGGGACGGCG CGACGACGCT CGCCGTCAAC
GGCCTGTACC GGCACGGCTT CATGATCGCG CCGGAAGTCG CGCATGCGGC GGTCGCGTTC
GCGCAGGCCG CGCTCGGCGG CGCGTTCGCC GATGCCGATG CGTTCGCCGC ATGGCGCGAT
GCCGCGCGCT GGCCGGCGCT CCTTCATCAC CGCGACGACG TGCGCCAGCC GGCCTGA
|
|---|
| Protein sequence | MNVHASRPDF AVLGGGLVGR LIAWRLAGDG HRVALYERGG PDGEQSAAWI AAAMLAPLAE
AASAELLITE LGAASLARWP QWLAELPEPV FFQHHGTLVV WHHADRAEAP LFERRVRANA
PAELFDGGFV TLAGAQVDAA EPALAGRFAR GLLLPREGQL DNRQALRALA AGLAQRGVEL
HWHATIDDAN RPDAHFTIDC RGLGAKAALP ALRGIRGEVA RVHAPGIGLT RPVRLLHPRY
PLYIAPKQDD LYVIGATEVE GEDMSPVSVR SALELLSAAF SVHPAFGEAR ILELNAQCRP
TLPDHRPAVI WDGATTLAVN GLYRHGFMIA PEVAHAAVAF AQAALGGAFA DADAFAAWRD
AARWPALLHH RDDVRQPA
|
|---|
| |