Gene Bamb_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0326 
Symbol 
ID4309986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp372275 
End bp372823 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content73% 
IMG OID638148114 
Product2'-5' RNA ligase 
Protein accessionYP_772220 
Protein GI115350381 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCG ACCGGCTCCG TGCGTTCGTC GCGCTGATGC CCGATACGGC ATCGCGCGAC 
GCGCTGCACG CGCTGCCGGT CACCCGCGGT GCACGGCGCA CGCTGCCCGC GCAACTGCAC 
GTAACGCTTG CGTTCATCGG CGCGATCGAA CGTGCGCGGT GCGACGCGCT GGCCGAGCGG 
TTGCCGGCGC TCGCGAGCGC GCATGCGCTG CCGTTGCAGC GGGTCGAGCG GATCGCGTGG 
TGGCCGAGCC TGCCGCGCGC GCGGCTGATC GTCGCGGAAC TCGCCGCCGA TCCCGCCTGT 
ACGGCGCTGA ATGCCGATTT ATCCGCGCTA TTGCGCGAAC TGGGCGTGCC GGCCGACCGC 
CGGCCGTTCC GGCCGCATGT GACGCTCGCG CGGCTGCCGC GCGATGCCGA CGGACAGCCC 
GCGCACGGCG GCGCGACCGG CCGGCCGGTC GCGGTGCGCT TCGTCGCGCT GACGCTGTTC 
GAAAGCCGGC TGTCGCACGA CGGTGTGTCG CATGTGCCGA TCGTGTCGGT GCCGATCGGG 
CGGGCGTAG
 
Protein sequence
MNGDRLRAFV ALMPDTASRD ALHALPVTRG ARRTLPAQLH VTLAFIGAIE RARCDALAER 
LPALASAHAL PLQRVERIAW WPSLPRARLI VAELAADPAC TALNADLSAL LRELGVPADR 
RPFRPHVTLA RLPRDADGQP AHGGATGRPV AVRFVALTLF ESRLSHDGVS HVPIVSVPIG 
RA