Gene Bamb_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0320 
Symbol 
ID4309980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp361140 
End bp361853 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID638148108 
Producthypothetical protein 
Protein accessionYP_772214 
Protein GI115350375 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.396962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGGT TAGCACGACT CTACGTTCCC GACCAGCCGC AGCACGTGAT ACTGCGCGGC 
CTGGATCAGC AACCCGCGTT CGTCGACGAC CAGGACTACG AACTCTTCAT CGATTGCCTG
AAGGCCGCGG CACGCGATCA CCATCTTTCG GTGCATGCCT ATGTGCTGCT CCCGCGTCAG
GTGCAACTCC TCGTGACGCC GAGCGACGAG GCGAGCCTGC CGAAGGCGAT GCAGGCGGTC
GGCCGCCGCT ACGTCGCGCA TTTCAACCGG CGCTATTCGC GTCGCGGCAC CCTGTGGGAA
GGCCGCTATC GGGCGACCGT GATCGAGGGC GAGCGCTATT TCCTGCTCGC GAGCCGCGTG
GTCGAGATGA GCCCGGTGCG CGCGCAGCTG GTCGCGACGC CCGACGCCTA TCGCTGGTCG
AGCTACCGGC ACCACGTCGG GCTCACCGTC GACAGCCTGA TCACCGACCA TCCGCTCTAC
TGGGCGCTCG GCAACACGCC GTTCGACCGG CAGCGTGCGT ACAAGGAGCT GTGCGAACAG
CCGCTCGACG AGCGGCAGGC CGATCAGCTT CAACAAGCGA CGCTGAAGGG CTGGGTGCTC
GGCGGCGAGA ATTACCGCGA GTGGGCGGCT CGCACCGCCA ATCGTCGCGT GTCGCCGCTG
CCGCGCGGAC GCCCCAGAAA GGTGCGTGAA AACACGCCGC CCATCCAGCA ATAG
 
Protein sequence
MARLARLYVP DQPQHVILRG LDQQPAFVDD QDYELFIDCL KAAARDHHLS VHAYVLLPRQ 
VQLLVTPSDE ASLPKAMQAV GRRYVAHFNR RYSRRGTLWE GRYRATVIEG ERYFLLASRV
VEMSPVRAQL VATPDAYRWS SYRHHVGLTV DSLITDHPLY WALGNTPFDR QRAYKELCEQ
PLDERQADQL QQATLKGWVL GGENYREWAA RTANRRVSPL PRGRPRKVRE NTPPIQQ