| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0310 |
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| Symbol | |
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| ID | 4308784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 350309 |
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| End bp | 351970 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148098 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_772204 |
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| Protein GI | 115350365 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAT ACGGATGGTG GGCGATCGCA TTCCAGGTCG CATCATGCAT GGCCGCGGCA
CACGCGGCGC TACCGCCTTT GCCTCCGTTG CCCCCTTTGC CGCCGGCCGG CTGGTCGATC
GCATCGATGC AGGCGTCCGT TGAGGACACA CCGCTGCCGC ACGGCGCGCT CGATGGCGCG
GACGGCATGA ATGGTGCCGC CTCCACACAG GACGGCCCAC AGCCGTTCGA TCGGGCCGCG
CGTGCAGCCG TTCGGGCAGG CACGACCGCG CCGGTACCGT TGCTGGAAGG GCCGCCGATC
CCCTTGCCGC CGCCGACGCG CATGAGCGAC GCCGCGGCGC GGCACCCCGG CGATGCGGAC
GACGCGCGGC GGATCTCGCT GAACCTGCAA GGCGCCGGGC TCGCGGCTGC ATTCGATGCG
CTCGCACGAT TCACCGGGCT CAACATCATC GTCGGTGAAC AGGTGCGCGG CACCGTGACG
TTACGTCTGA ACAATGTCCG CTGGCGCGAT GCGTTCGATA CGTTGCTCGA TACGCACGGG
CTGGCCATGT CGCGGCGCGG CAACGTGATC TGGGTCACGC CGGCGGCCGA ACTCGCGGCG
CGGGAGCGCG AGCGCTTCGA AACGCACGCC CGCGCGGCCG AGCTGGAGCC GCTCGCGAGC
CGGACCTTCG CGCTGCATTA CCCGCGCGCG CTGGACGTGC AGCGGCTGCT GGCCGGTGCG
ACCGGCCAGC GCCTGCTGTC GAAACGCGGC GCGGCGGCGG CCGATCCGCG CACGAACCTG
CTGTTCGTCA CCGATCTTGC GCCGCGCATC GCGCAGATCG CGGGGCTGAT CGACGCGATC
GACCGGCCGT CGCGACAGGT GCGGATCGAG GCGCGCATCG TCGAAGGCGA ACAGGGCTTC
TCGCGTAACC TCGGTGCTCG CATCGCGTTG CGCGCGCAGG GACGGGCGCC CACCGCCGAC
GGCGCGGCAT CCGCGACCGA CACGCGCAAC GCGCTCGATC TCGCCGCGCG GCCGCTCGGC
GGCTTCGAGG CGGCGACGGC CGGCTTCACG TTGTTCGCCG CGCCGCTGAG CCGCGTGCTC
GACGTCGAGC TGAGCGCGCT CGAGGCGCAG GGGCGGGGCC AGATCGTCTC CAGCCCGCGG
GTGGTCACGG CCGACCGCGT GAAGGCGATC GTCGAACAGG GCTCGGAGCT GCCGTATCAG
GCCAAGGTCG GCAATGGCGT GAGCGGCGTG CAGTTCCGCC GCGCGACACT GAAGCTCGAG
GTCGAGCCGC AGATCACGCC CGACGGGCGG GTCGTGCTCG ACCTCGACGT GACGAAGGAC
AGCATCGGCG AGCCGACCGC GGCCGGCCCC GCGATCCATA CGAAGCACGT CCAGACGCGC
GTGGAGGTCG AAAACGGCGG GACGGTCGCG ATCGGCGGGA TTTACGAGCA GTTGAACCGG
GATGATGTGA CGCGGGTGCC GCTCTTGGGC AAAATACCGG TACTGGGCGC GCTTTTCCGG
CACCGCGCGC GGCGCGACCA GCGCAGCGAA CTGGTCGTCT TCATCACGCC GACGGTCGTC
GGCACGCAGT GCGCGACGTC CAGCGCGGGC GATGCGGACG CGGGAAAAAG GGGGCCGGAA
GCGGGTGGCG CAGGCTCGAC AAGGCAGCCG CTTTGCCAGT AA
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| Protein sequence | MTKYGWWAIA FQVASCMAAA HAALPPLPPL PPLPPAGWSI ASMQASVEDT PLPHGALDGA
DGMNGAASTQ DGPQPFDRAA RAAVRAGTTA PVPLLEGPPI PLPPPTRMSD AAARHPGDAD
DARRISLNLQ GAGLAAAFDA LARFTGLNII VGEQVRGTVT LRLNNVRWRD AFDTLLDTHG
LAMSRRGNVI WVTPAAELAA RERERFETHA RAAELEPLAS RTFALHYPRA LDVQRLLAGA
TGQRLLSKRG AAAADPRTNL LFVTDLAPRI AQIAGLIDAI DRPSRQVRIE ARIVEGEQGF
SRNLGARIAL RAQGRAPTAD GAASATDTRN ALDLAARPLG GFEAATAGFT LFAAPLSRVL
DVELSALEAQ GRGQIVSSPR VVTADRVKAI VEQGSELPYQ AKVGNGVSGV QFRRATLKLE
VEPQITPDGR VVLDLDVTKD SIGEPTAAGP AIHTKHVQTR VEVENGGTVA IGGIYEQLNR
DDVTRVPLLG KIPVLGALFR HRARRDQRSE LVVFITPTVV GTQCATSSAG DADAGKRGPE
AGGAGSTRQP LCQ
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