Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0306 |
Symbol | |
ID | 4308780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 345277 |
End bp | 347670 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148094 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_772200 |
Protein GI | 115350361 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATGC AATCCACGTC TCCTACGTCC CCGCCTCCCC CGCCGGAGCC GAAGAAACGG CCCTGGTGGC AGAAAGCCCT GATCGGCGTC GCCGCGATGT GCGTGGCCCT CGTCGTGGCC GGCGGCCTCG TGCTCGGCTA CGCGCTCGTC GTCGCGTGGC CGAACATGCC GTCGCTCGAC GCGCTGACCG ACTATCGTCC GAAGGTACCG CTGCGCATCT ACACGTCCGA TCACGTGCTG ATCGGCGAAT TCGGCGAGGA ACGCCGCGAC ATCGTCCATT TCAAGGAGGT GCCCGACTCG CTCAAGAAGG CGATCCTCGC GATCGAGGAC GCACGCTTCT ACGATCACGG CGGCGTCGAC CTCACCGGCA TCGCCCGCGC CGGCTTCGTC GCGCTGACGA ACGGCCATGC GTCGCAGGGC GCGAGCACGA TCACGATGCA GGTCGCGCGC AACTTCTTCC TGTCGAGCGA GAAGACCTAC ACGCGCAAGA TCTACGAGAT GCTGCTCGCG TACCGCATCG AGCGCGCGCT GACGAAGGAT CAGATTCTCG AGGTCTATAT GAATCAGATC TATCTCGGCC AGCGTGCGTA CGGCTTCGCG AGCGCCGCGC GCGTGTATTT CGGCAAGGAC CTGAAGGACA TCACGCTCGC GGAAGCGGCG ATGCTAGCGG GGCTGCCGAA GGCGCCGTCC GCGTATAACC CGGTCGTCAA CCCGAAGCGC GCGAAGGTCC GCCAGGAATA CATCCTGCAG CGGATGCTCG AGCTGAACTT CATCACGCGC GAGCAGTACG ACGAGGCTGC CGCGCAGCCG CTCGTCGTCA AGGGCGCGGG CCGCGAGTTC AGCGTGCACG CCGAGTACGT CGCGGAAATG GTCCGGCAGA TGATGTATGC GCAGTACCGC GAGGAAACCT ACACGCGCGG CTTCAACGTC GTCACGACGA TCGATTCCGC CGACCAGCAG GTCGCGTACA CCGCGCTGCG CAAGGGCATC ATGGATTACG AGCGTCGCCA CGGCTATCGC GGGCCGGAAG GCTTCATCGA GCTGCCGGCC GGCGCCGACG ACCGCGAACA GGCGATCGAC GACGCGCTGC TCGAGCATCC CGACAACGGC GAATTGATCG CGGCGGTCGT CACCGCGGCC ACCCCGCGCC AGATCACGGT AGCCTTCATC GACGGCAGCA CCGCGACGAT CGAAGGCGAC AACCTGCGCT TCGCGTCGGG CGCGCTGTCG GCCAACGCGC AGCCGAACCG CCGCATCCGC CCGGGCGCGA TCGTCCGTGT CGTGAAGAAC GACGCCGGCA AGTGGTCGAT CACGCAGTTG CCGCAGGTCG AGGGCGCGTT CATCTCGATC GTCCCGCAAG ACGGCGCGAT CCGCTCGCTC GTCGGCGGCT TCGACTACAA CAAGAACAAG TTCAACCACG TCACGCAGGC GTGGCGGCAA CCGGGTTCGT CGTTCAAGCC GTTCATCTAC TCGGCGTCAC TCGACAAGGG CCTCGGGCCG GCCACGGTGA TCAACGACGG CCCGCTGTAT TTCAGCGCCG CGGAAACCGG CGGCCAGCCG TGGGAACCGA AGAACTACGG CGGCGGCTTC GAAGGTCCGA TGTCGATGCG CACCGCGCTG CAGCGCTCAC GCAACCTCGT GTCGATCCGG ATCCTGAACC AGATCGGCAC GAAGTACGCG CAGCAGTACA TCACGCGCTT CGGCTTCGAC GCCGACCGCC ATCCGGCCTA CCTGCCGATG GCGCTCGGTG CGGGCCAGGT CACGCCGCTG CAGATGGCCG GCGCGTACTC GGTGTTCGCG AACGGCGGCT TCCGCGTGAA CCCGTATCTG ATCGCCGAAG TGACCGATCC GAACGGCGCG ATCGTCGCAC GCGCGCAGCC GCTCATCGCC GAGCAGAACG CGCCGCGCGC GATCGACGCA CGCAACGCGT ACGTGACGAA CAGCCTGCTG CAGAGCGTCG CGCAGCGCGG CACGGGCGCA CGCACCAACG TGCTGAAGCG CACCGACCTC GCGGGCAAGA CTGGTACGAC GAACGACTCG CACGACGCGT GGTTCGCCGG CTACCAGCAC ACGCTCGCGG CGATCGCATG GATCGGCTAC GACAATCCGC GCAGCCTCGG CGATCGCGAA ACCGGCGGCG GCCTGTCGCT GCCGGTCTGG ATCGAATACA TGGGTGCGGC GCTGAAGGGC GTGCCGGAGT TCAAGCCGAC GATGCCGGAC GACGTCCAGT CGATCGGCGG CGAGCTGTAC TTCACCGAGT TCACGCCGGG GCACGGCTTC GTATCGACGG TCGGCGTGCC GCAGGCGCCG GCTGTGCAGG ACACCGAGGA ACCGGTGCCG CACGTCGACG AGCAGGAAAA GCAGGACATC ATGAACCTGT TCCGCGGCCA CTGA
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Protein sequence | MPMQSTSPTS PPPPPEPKKR PWWQKALIGV AAMCVALVVA GGLVLGYALV VAWPNMPSLD ALTDYRPKVP LRIYTSDHVL IGEFGEERRD IVHFKEVPDS LKKAILAIED ARFYDHGGVD LTGIARAGFV ALTNGHASQG ASTITMQVAR NFFLSSEKTY TRKIYEMLLA YRIERALTKD QILEVYMNQI YLGQRAYGFA SAARVYFGKD LKDITLAEAA MLAGLPKAPS AYNPVVNPKR AKVRQEYILQ RMLELNFITR EQYDEAAAQP LVVKGAGREF SVHAEYVAEM VRQMMYAQYR EETYTRGFNV VTTIDSADQQ VAYTALRKGI MDYERRHGYR GPEGFIELPA GADDREQAID DALLEHPDNG ELIAAVVTAA TPRQITVAFI DGSTATIEGD NLRFASGALS ANAQPNRRIR PGAIVRVVKN DAGKWSITQL PQVEGAFISI VPQDGAIRSL VGGFDYNKNK FNHVTQAWRQ PGSSFKPFIY SASLDKGLGP ATVINDGPLY FSAAETGGQP WEPKNYGGGF EGPMSMRTAL QRSRNLVSIR ILNQIGTKYA QQYITRFGFD ADRHPAYLPM ALGAGQVTPL QMAGAYSVFA NGGFRVNPYL IAEVTDPNGA IVARAQPLIA EQNAPRAIDA RNAYVTNSLL QSVAQRGTGA RTNVLKRTDL AGKTGTTNDS HDAWFAGYQH TLAAIAWIGY DNPRSLGDRE TGGGLSLPVW IEYMGAALKG VPEFKPTMPD DVQSIGGELY FTEFTPGHGF VSTVGVPQAP AVQDTEEPVP HVDEQEKQDI MNLFRGH
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