| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0297 |
|---|
| Symbol | |
|---|
| ID | 4311301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 336186 |
|---|
| End bp | 337184 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638148085 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_772191 |
|---|
| Protein GI | 115350352 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.106807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCC ATCCGCTTCA TCGTCCGCGC CGGATGCGCC GCGACGACTT CTCCCGCCGC
CTGATGCGCG AAAACCGCCT GACCACCGAC GACCTGATCT ATCCGGTGTT CGTCGTCGAA
GGCACCAACG AACGCCAGCC CATACCGTCG ATGCCCGGCG TCGAACGCGT GTCGGTCGAT
CTGCTGATGC AGGTTGCCGA GCAGTGCGTC GAACTCGGTG TGCCCGTGCT GTCGCTGTTC
CCGGCCATCG AGCCGTCGCT GAAAACGCCC GACGGCCGCG AAGCGGCCAA TCCGGAAGGC
CTGATCCCGC GCGCGGTGCG CGAGCTGAAG AAGCGCTTCC CCGAACTCGG CGTGCTGACC
GACGTCGCGC TCGATCCGTA CACGAGCCAC GGCCAGGACG GCGTGCTCGA CGAAAACGGC
TACGTGATCA ACGACGACAC GATCGAGATC CTCGTCGACC AGGCGCGCGC GCAGGCGGAA
GCCGGAGTCG ATATCGTCGC GCCGTCGGAC ATGATGGACG GCCGCATCGG CGCGGTCCGC
GAAATGCTGG AAAGCGACGG CCACATCCAT ACGCGCATCA TGGCCTACTC GGCCAAGTTC
GCGTCGGCGT TCTACGGCCC GTTCCGCGAT GCGGTCGGCT CGGCGTCCAA CCTGGGCAAG
GGCAACAAGA TGACCTACCA GATGGATCCG GCGAACAGCG ACGAAGCGCT GCGCGAAGTC
CGCCTCGACA TCGACGAAGG CGCCGACATG GTGATGGTCA AGCCCGGCAT GCCGTATCTC
GACATCGTGC GCCGCGTGAA GGACGAGTTC CGCTTCCCGA CCTACGTGTA TCAGGTGAGC
GGCGAATACG CGATGCTGAA GGCCGCCGCG ATGAACGGCT GGCTCGATCA CGACAAGGTC
GTGCTCGAAT CGCTGCTCGC GTTCAAGCGC GCGGGCGCCG ATGGCGTGCT CACGTACTTC
GCGCTCGATG CCGCGCGTCT GCTGAAAGCG CAGCGCTGA
|
|---|
| Protein sequence | MSFHPLHRPR RMRRDDFSRR LMRENRLTTD DLIYPVFVVE GTNERQPIPS MPGVERVSVD
LLMQVAEQCV ELGVPVLSLF PAIEPSLKTP DGREAANPEG LIPRAVRELK KRFPELGVLT
DVALDPYTSH GQDGVLDENG YVINDDTIEI LVDQARAQAE AGVDIVAPSD MMDGRIGAVR
EMLESDGHIH TRIMAYSAKF ASAFYGPFRD AVGSASNLGK GNKMTYQMDP ANSDEALREV
RLDIDEGADM VMVKPGMPYL DIVRRVKDEF RFPTYVYQVS GEYAMLKAAA MNGWLDHDKV
VLESLLAFKR AGADGVLTYF ALDAARLLKA QR
|
|---|
| |