| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0287 |
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| Symbol | secY |
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| ID | 4311291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 328759 |
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| End bp | 330108 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638148075 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_772181 |
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| Protein GI | 115350342 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.464033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAACA GCCCGAGTCT TGCAAAACCC GGTCGAAGCA CGGCGAAATT CGGCGATCTG
CGTCGGCGAG CGATGTTCCT GCTCCTGGCG CTGATCGTCT ATCGCATCGG CGCGCACATC
CCCGTGCCGG GCATCGATCC GGATCAACTG GCGAAGCTGT TCCAGAGCCA GGCGGGCGGC
ATCCTGGGCA TGTTCAACAT GTTCTCGGGT GGTGCGCTTT CCCGCTTCAC GATCTTTGCG
CTGGGGATCA TGCCGTACAT CTCGGCGTCG ATCATCATGC AGTTGCTGGC GATCGTCTCG
CCGCAGCTCG AGGCGCTGAA GAAGGAAGGG CAGGCAGGGC AACGGAAGAT CACGCAGTAC
ACGCGGTATT TCACCGTGGT GCTCGCGACC TTCCAGGCGT TCGGTATCGC GGCTGCGCTG
GAAAACCAGC CTGGCCTCGT GATCGACCCC GGCATGCTGT TCCGACTGAC GACGGTTGTG
ACGTTGGTAA CCGGCACGAT GTTCCTGATG TGGCTGGGTG AGCAGATCAC CGAGCGTGGT
CTGGGCAACG GCATCTCGAT CATCATCTTC GGCGGGATCG CAGCAGGGTT CCCGAATGCC
GTCGGTGGGC TGTTCGAGCT GGTGCGTACG GGTTCGATGA GCATCATTTC GGCGATCATC
ATCGTCGTTC TGATTGCCGC GGTGACTTAC CTGGTCGTGT TCATCGAACG CGGTCAGCGC
AAGATCCTCG TGAACTACGC GAAGCGCCAG GTCGGCAACA AGATCTACGG TGGACAGTCG
TCGCACTTGC CGCTGAAGCT GAACATGTCG GGCGTGATTC CGCCGATCTT CGCATCGTCG
ATCATCCTGT TTCCGGCCAC GATTCTCGGC TGGTTCAGCA CGGGTCAGCC GACGGGGAGC
TGGATCTCCA ACACGTTGCA TAACGTCGCG GAGGCGCTGA AGCCGGGTCA GCCGGTCTAT
GTGCTGCTGT ACACGCTGGC AATCGTGTTT TTCTGCTTCT TCTACACCGC ACTGGTGTTC
AACAGCAGGG AAACCGCGGA CAACCTGAAG AAGAGCGGGG CGTTTGTTCC GGGTATTCGT
CCGGGCGATC AGACCGCACG ATACATCGAC CGCATCCTCA CGCGTCTGAC GCTGGCTGGT
GCGATCTACA TCGTCTTCGT GTGTCTGCTG CCGGAATTCC TGGTGCTGCG CTGGAACGTG
CCGTTTTATT TTGGTGGAAC GTCGCTGCTG ATCATTGTCG TCGTCACGAT GGACTTCATG
GCGCAGGTGC AGTCGTACGT TATGTCGCAA CAGTATGAGT CGCTGCTCAA GAAGGCAAAC
TTCAAGGGCG GCAACATCCC AATGCGTTAA
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| Protein sequence | MANSPSLAKP GRSTAKFGDL RRRAMFLLLA LIVYRIGAHI PVPGIDPDQL AKLFQSQAGG
ILGMFNMFSG GALSRFTIFA LGIMPYISAS IIMQLLAIVS PQLEALKKEG QAGQRKITQY
TRYFTVVLAT FQAFGIAAAL ENQPGLVIDP GMLFRLTTVV TLVTGTMFLM WLGEQITERG
LGNGISIIIF GGIAAGFPNA VGGLFELVRT GSMSIISAII IVVLIAAVTY LVVFIERGQR
KILVNYAKRQ VGNKIYGGQS SHLPLKLNMS GVIPPIFASS IILFPATILG WFSTGQPTGS
WISNTLHNVA EALKPGQPVY VLLYTLAIVF FCFFYTALVF NSRETADNLK KSGAFVPGIR
PGDQTARYID RILTRLTLAG AIYIVFVCLL PEFLVLRWNV PFYFGGTSLL IIVVVTMDFM
AQVQSYVMSQ QYESLLKKAN FKGGNIPMR
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