| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0261 |
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| Symbol | |
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| ID | 4309486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 312249 |
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| End bp | 314096 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148049 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_772155 |
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| Protein GI | 115350316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.313912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCG CCCTCGAAAT CCTCGACGAA GTATTTGGTT ATTCCGCATT TCGCGGCCAG
CAGGGCGAAA TCGTCGAACA CGTCGCCGGC GGCGGCGATT GCCTCGTGCT GATGCCGACC
GGCGGCGGCA AGTCGCTGTG CTACCAGATT CCGGCGCTGC TGCGCCGCGA GGCGGGGCAG
GGCGCGGGCA TCGTCGTGTC GCCGCTGATC GCGCTGATGC AGGACCAGGT CGCCGCGCTC
AGCGAAGTCG GCGTGCGCGC GGCGTATCTG AACTCGACGC TGTCGGGCGC CGAAGCCGCG
GCCACCGAAC GCGCGCTGCG CGAAGGCGAG ATCGATCTGC TGTACGTGGC GCCCGAGCGG
CTGATGACGG GGCGCTTCCT CGAGCTGCTC GAACGCGCGA GGATCGGCCT GTTCGCGATC
GACGAGGCGC ACTGCGTGTC GCAGTGGGGG CACGACTTCC GTCCCGAATA CATTCAGCTG
TCGGTGTTGC ACGAGCGCTT CCCGTCGGTG CCGCGTATCG CGCTGACGGC CACCGCCGAC
GCGATCACGC GCGACGAGAT CATCCATCGC CTCGCGCTCG ACGATGCGCG CGTGTTCGTG
TCGAGTTTCG ATCGCCCGAA CATCCGTTAC CGGATCGTCG AGAAGGACAA CGCGCGCGCG
CAGCTGCTCG ACTTCATCCG CGCGGAGCAT ACGAACGCGG ACGGCACGAC CGACGCGGGC
GTCGTCTACT GCCTGTCGCG CCGCAAGGTC GAGGAAACGG CCGAATGGCT GAAGGCGCAG
GGCGTGCGGG CGCTGCCGTA TCACGCGGGG ATGGAGTTCG AGGTGCGGCA GAAGCACCAG
GAAATGTTCC AGCGCGAGGA AGGCGTCGTG ATGTGCGCGA CCATCGCGTT CGGCATGGGC
ATCGACAAGC CGGACGTGCG CTTCGTCGCG CACCTCGATT TGCCGAAGAG CGTCGAAGGC
TATTACCAGG AAACGGGCCG TGCGGGCCGC GACGGGATGC CGGCGAACGC GTGGATGGCG
TATGGCCTCG GCGACGTCGT CCAGCAGCGC AAGATGATCG ACGAATCCGA TGCGGACGAC
GCGCACAAGC GCGTCCAGAC GTCGAAGCTC GACGCGCTGC TCGGGCTGTG CGAGACGATC
TCGTGCCGGC GCGTGCGATT GCTGAACTAC TTCGGCGAGG CGAGCCAGCC GTGCGGCAAC
TGCGACACCT GCCTCGAGCC GCCCGATTCG TGGGATGCGA CGCGCGAGGC GCAGATGGCG
CTGTCGTGCG TGTTCCGCGC GCAGCGCGCG AGCGGCTTCA ATTTCGGCTC GAGCCATCTG
ATCGAGATCC TGCGCGGCGG CCGCACCGAG AAGGTGCTGC AGCGCGGTCA TGACCAGCTC
AGTACGTTCG GGATCGGCGC GGCGCTGTCC GAGCCCGAAT GGCGCGCGAT TTTCCGGCAG
CTCGTCGCAT ACGGCTATCT GGCGGTCGAC CATGGCGGAT TCGGCGCGCT CATGCTGACC
GAGGCCGCGA AGCCGGTGCT GAAGAACGAG GAGAAGGTCA CGCTGCGCCG CTACGTGAAG
CCGCAGCGCA CGCGCCAGTC GTCCAGCCGC AGCGGCACGC GGGTCGACCC GACGGCCGGC
ATGGGCGCGC GCGAGCGGGC CCGCTGGGAT GCGTTGCGTG CGTGGCGCGC GGAAACCGCG
AAGTCCGACG GCGTGCCGGC CTACGTGATC TTCCACGACG CCACACTCGC CGAAATCGCG
CGCAATGCGC CCGAGACGAT CGAGGACCTG CGCCATATCC CCGGCATGGG CGTGCGCAAG
CTCGAACGCT TCGGCGACGA GATCATCGAC GTCGTCGAAT CCGCATGA
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| Protein sequence | MSRALEILDE VFGYSAFRGQ QGEIVEHVAG GGDCLVLMPT GGGKSLCYQI PALLRREAGQ
GAGIVVSPLI ALMQDQVAAL SEVGVRAAYL NSTLSGAEAA ATERALREGE IDLLYVAPER
LMTGRFLELL ERARIGLFAI DEAHCVSQWG HDFRPEYIQL SVLHERFPSV PRIALTATAD
AITRDEIIHR LALDDARVFV SSFDRPNIRY RIVEKDNARA QLLDFIRAEH TNADGTTDAG
VVYCLSRRKV EETAEWLKAQ GVRALPYHAG MEFEVRQKHQ EMFQREEGVV MCATIAFGMG
IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGMPANAWMA YGLGDVVQQR KMIDESDADD
AHKRVQTSKL DALLGLCETI SCRRVRLLNY FGEASQPCGN CDTCLEPPDS WDATREAQMA
LSCVFRAQRA SGFNFGSSHL IEILRGGRTE KVLQRGHDQL STFGIGAALS EPEWRAIFRQ
LVAYGYLAVD HGGFGALMLT EAAKPVLKNE EKVTLRRYVK PQRTRQSSSR SGTRVDPTAG
MGARERARWD ALRAWRAETA KSDGVPAYVI FHDATLAEIA RNAPETIEDL RHIPGMGVRK
LERFGDEIID VVESA
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