| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0223 |
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| Symbol | |
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| ID | 4309971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 258788 |
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| End bp | 259993 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148002 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_772117 |
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| Protein GI | 115350278 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC GCCCGCGCCC
CGCCGGCGCC GGTGGGTCCG CTATGCGGTC GCCGCCGTGC TCGTGATCCT CGCGATCGCA
GCCGCGCTCG CGCTCACCGG CCGGCCGACG GTCGACACGA CCTCCGTCAC GTCCGCGTAC
CCGTACCAGA ACGACACCCA GCTCAATGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC
GCGGTCGCGT CGAAGGGCCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC
GTGAAGAAGG GCGAGATCAT CGCGCGGCTC GAGAGCCGTG ACGTGGAAGC CTCGCTGGCG
CAGGCCCGCG CGCAGGTGCT GGTCTCCCGG GCGAACCTCG GCGTCGCGCA GGCGGAACTG
AAGGACGCGC AGATTGCGCT GCGCCGCAGC GCCGTGCTCG CCCCGAAGGG CGCGGTGCCG
GCTGCGCAGC TCGACACCGA CACGGCCCGC GCGAACAAGG CGCGCGCGAC GCTCGGCAGC
GACCAGGCCG CGATCGCGTC CGCCGAAGCG AACGCGCAGG CCGCGCAGGT CGCGGTCGAC
CAGACGGTGA TCCGCGCACC GTTCGACGGC ATCGTGCTCG CGAAGCACGC GAACGTCGGC
GACAACATCA CGCCGTTCTC GTCGGCGTCG GACAGCAAGG GCGCCGTCGT GACGATCGCC
GACATGGATA CGCTCGAGGT CGAGGCCGAC GTCGCGGAAT CGAACATCGC GAAGATCCGC
GCGGAGCAGC CGTGCGAGAT CCAGCTCGAC GCGCTGCCCG ACATGCGCTT CGCGGGCCGC
GTGTCGCGCA TCGTGCCGAC CGTCGACCGC TCGAAGGCGA CGGTGCTCGT GAAGGTGCGC
TTCGTCGACC GCGACGAGCG GGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG
AAGCCGGCGT CGGCGCAGGA CCGGCAGCCG GTGACGGCCG TGCAGGCGAG CGCCGTGGTC
GAGCGCGACG GCCGCCCGGT CGTGTTCGTC GTGAAGGACG ACACCGTACA CGCAACCGCG
GTGACGACCG GCACGCGGAT CGGCGAACTC GTCGCGATCC GCGGCGTGAA GCCCGGCGAC
ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAAAGTGAC CGTCGCGAAG
AAGTAG
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| Protein sequence | MPDHNLDKLK IDRRPIAPAP RRRRWVRYAV AAVLVILAIA AALALTGRPT VDTTSVTSAY
PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKGEIIARL ESRDVEASLA
QARAQVLVSR ANLGVAQAEL KDAQIALRRS AVLAPKGAVP AAQLDTDTAR ANKARATLGS
DQAAIASAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA
DMDTLEVEAD VAESNIAKIR AEQPCEIQLD ALPDMRFAGR VSRIVPTVDR SKATVLVKVR
FVDRDERVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDTVHATA
VTTGTRIGEL VAIRGVKPGD TVVLAPGAKL KDGAKVTVAK K
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