| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0216 |
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| Symbol | |
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| ID | 4309964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 250641 |
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| End bp | 252038 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638147995 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_772110 |
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| Protein GI | 115350271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAT CCCGCCGTGC CGGCACGCCG CGCGTCACGC GCATGCAGGT GATCCCCGTC
GCCGGCCGCG ACAGCATGCT GCTGAACCTG TGCGGCGCGC ACGCGCCGTA TTTCACGCGC
AACCTCGTGA TACTCGACGA CAGCAGCGGC CACACGGGCG TCGGCGAAGT GCCCGGCGGC
GAAGGCATCC GGCATGCGCT CGAACGGATG ACCGACCTCG TGGTCGGCCA GTCGATCGGG
CGTTACCAGG CCACGCTCAA CGCGGTGCGC GCGGCGCTGT CCGGCGCGGC GGCCGGCGCC
GGACGCACGA TCCAGCACGA AGTGACGTCG GCCGGCGAGG CGGCCGTGCT GCGCCAGCCG
CACGAGATCA ACCTGCGGCT CGACAACGTG ATCACCGCGA TCGAGGCCGC GCTGCTGGAC
CTGCTCGGCC AGCATCTCGA CGTGCCGGTC GCCGCGTTGC TCGGCGAAGG GCAGCAGCGC
GACGCGGTGC CGATGCTCGC GTACCTGTTC TACATCGGCG AGCGGCGCCG CACCGACCTG
CCGTATCGCG ACGAAACGCA GGCAACCGAT CCGTGGTTCC GCCTGCGCAA CGAAGCGGCG
CTCACGCCGG CCGCGATCGC GCAGCAGGCC GAGGCCGCGG TCGAACGCTA CGGCTTCGCC
GATTTCAAGC TGAAGGGTGG CGTGATGGCC GGCGCGGACG AGATGGAGGC GATCGCGGCG
ATCAAGGCGC GCTTTCCCGA CGCCCGCGCG ACGCTCGATC CGAACGGCGC GTGGTCGCTC
GACGAAGCGG TCGCGCTGTG CCGCGGGCAA GGCCACCTGC TCGCGTATGC GGAGGACCCG
TGCGGGCCGG AAGCCGGCTA CTCGGGCCGC GAGGTGATGG CCGAGTTCCG CCGGGCGACC
GGCATCCCGA CCGCGACCAA CATGATCGCG ACCGACTGGC GGCAGATGGA TCATGCGGTG
CGGCTGCGGG CGGTCGACAT CCCGCTCGCC GATCCGCACT TCTGGACGAT GCAGGGTTCG
GTGCGGCTCG CGCAGCTGTG CCGCGACTGG GGGCTCACGT GGGGTTCCCA CTCGAACAAT
CACTTCGACG TGTCGCTCGC GATGTTCACC CATGCGGCCG CGGCGGCGCC CGGCACGATC
ACCGCGATCG ACACGCACTG GATCTGGCAG GAAGGCGACG CGCGGCTCAC GCGGGAACCG
CTCGAGATCG TCGGCGGCCA GGTGGCCGTG CCCGAGCGGC CGGGGCTCGG GATCGAGCTC
GACATGGCGC AGGTCGAGGC CGCGCATGCG CTGTATCGGG AGGTCGGTGG CACGGCGCGC
GATGATGCGA TGGCGATGCG GTATCTGGTG CCGGGGTGGA CGTATGATCC GAAGCGGCCG
AGTTTCGGGC GCGGGTGA
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| Protein sequence | MSESRRAGTP RVTRMQVIPV AGRDSMLLNL CGAHAPYFTR NLVILDDSSG HTGVGEVPGG
EGIRHALERM TDLVVGQSIG RYQATLNAVR AALSGAAAGA GRTIQHEVTS AGEAAVLRQP
HEINLRLDNV ITAIEAALLD LLGQHLDVPV AALLGEGQQR DAVPMLAYLF YIGERRRTDL
PYRDETQATD PWFRLRNEAA LTPAAIAQQA EAAVERYGFA DFKLKGGVMA GADEMEAIAA
IKARFPDARA TLDPNGAWSL DEAVALCRGQ GHLLAYAEDP CGPEAGYSGR EVMAEFRRAT
GIPTATNMIA TDWRQMDHAV RLRAVDIPLA DPHFWTMQGS VRLAQLCRDW GLTWGSHSNN
HFDVSLAMFT HAAAAAPGTI TAIDTHWIWQ EGDARLTREP LEIVGGQVAV PERPGLGIEL
DMAQVEAAHA LYREVGGTAR DDAMAMRYLV PGWTYDPKRP SFGRG
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