Gene Bamb_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0200 
Symbol 
ID4309163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp235155 
End bp235766 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID638147979 
Productrare lipoprotein A 
Protein accessionYP_772095 
Protein GI115350256 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC GTTTTCCGAC TCGATTCGGG ACCATTGCAT TATTTTTCGC GCTGACGGGC 
TGTGCGGTGC CATCCAGCCA GACGACCGGC AGCATCAACC AGAAGAGCGC GGTCAGCAAG 
ACGGCCGCGG CCGCCAAGGC GGACGACGAC AAGCAGCAAC TGAGTTTCGA TTCCGCGCTG 
GCATCGATGC CAGCTGCCGA CAGCAAGGAC GCGAAGAAGT CGTCGCTGGC GGACGCCGAG 
CCGATCGACG GCAAGGACGT GTCCGACTTC CGCCAGACGG GCCGGGCATC GTGGTATGGC 
CGGGATTTCC ACGGCCGGCG CACCGCGAAC GGCGAGCGCT TCAACATGAA CGCGCTGACC 
GCCGCGCACC GCACGCTGCC GCTGTCCTCG TACATCAAGG TGACGAATTC GTCGACCGGC 
AAGTGGGTCG TCGTGAAGGT CAACGATCGC GGGCCGTACA AGCGCGGCCG CGTGCTCGAC 
CTGTCGTATG CAGCTGCCAG GATGATCGGT CTCGTGCACT CCGGCACGGG TCGCGTGAAG 
ATCGAAGGGC TGTCGCCGCA GGAAGCGCGC GAGGCACGCG ACGAAATGCT CGCGTCGCTA 
TCGACGAAGT AA
 
Protein sequence
MNLRFPTRFG TIALFFALTG CAVPSSQTTG SINQKSAVSK TAAAAKADDD KQQLSFDSAL 
ASMPAADSKD AKKSSLADAE PIDGKDVSDF RQTGRASWYG RDFHGRRTAN GERFNMNALT 
AAHRTLPLSS YIKVTNSSTG KWVVVKVNDR GPYKRGRVLD LSYAAARMIG LVHSGTGRVK 
IEGLSPQEAR EARDEMLASL STK