Gene Bamb_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0199 
Symbol 
ID4309162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp233852 
End bp234496 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID638147978 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_772094 
Protein GI115350255 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.604325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CGCTCATTCC GGTCACGCCG TTCCAGCAGA ACTGCTCGCT GGTCGTCTGC 
GAAAAGACCG GCCGCGCCGC CGTCGTCGAT CCGGGCGGCG ATCTCGAACG GATCGAAGAG 
GAGATCGCGC GGCAGAACGT GCAGCTCGAG AAGGTGCTGC TCACGCACGG CCACATCGAT 
CATTGCGGAG GCGCGAAGGC GCTCGCGACG CACTACGGCG TGCCGATCGT CGGGCCTCAG 
GAAGACGAGC GCTTCTGGAT CGAGCAGCTG CCGACGCAGA GCCAGCGCTT CGGCTTCCCG 
GCCGCCGAAA CGTTCGAGCC GGACCACTGG CTGAACGACG GCGACACCGT GCAGGTCGGC 
GACGAGACGC TCGAGGTCTA TCACTGCCCG GGCCACACGC CCGGCCACGT CGTGTTCTTC 
AGCCGCGCGC ATCACGTCGC GATCGTCGGC GACGTGCTGT TCGCCGGCTC GATCGGCCGC 
ACCGATTTCC CGCGCGGCAA CCATGCGGAC CTCGTGCGCT CGATCAAGGA GAAGCTGTGG 
CCGCTCGGCG ACGACGTCAC GTTCGTCCCG GGCCACGGCC CGGTGTCGAC CTTCGGCGAC 
GAACGCCGCA CGAATCCGTT CGTGTCCGAC AAGGTATTCG GATGA
 
Protein sequence
MKVTLIPVTP FQQNCSLVVC EKTGRAAVVD PGGDLERIEE EIARQNVQLE KVLLTHGHID 
HCGGAKALAT HYGVPIVGPQ EDERFWIEQL PTQSQRFGFP AAETFEPDHW LNDGDTVQVG 
DETLEVYHCP GHTPGHVVFF SRAHHVAIVG DVLFAGSIGR TDFPRGNHAD LVRSIKEKLW 
PLGDDVTFVP GHGPVSTFGD ERRTNPFVSD KVFG