| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0185 |
|---|
| Symbol | fliA |
|---|
| ID | 4308606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 218805 |
|---|
| End bp | 219536 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638147964 |
|---|
| Product | flagellar biosynthesis sigma factor |
|---|
| Protein accession | YP_772080 |
|---|
| Protein GI | 115350241 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACG CTCAAGGCAA GATGACCCAG GCCGACGTGC TCGCGCAATA CGCGCCGCTC
GTGCGGCGCC TGGGGCTGCA GCTCGTCGCG AAGATGCCGG CGAGCGTCGA CCTCGACGAC
CTGATCCAGG CCGGCATGAT CGGGCTGATG GACGCGGCCG GCCGCTACAA GGAAGACCAG
GGCGCGCAGT TCGAGACCTA CGCGACGCAG CGTATCCGCG GCGCGATGCT CGACGAGCTG
CGCAGCAACG ACTGGCTGCC GCGCAGCCTG CGCAAGACCT CGCGCGAGGT CGAGTACGCG
GTGCACCAGG TCGAGCAGCA GCTCGGCCGC TCGGCGAGCG AGACCGAGAT CGCGGAGCAC
CTGAAGATGC CGCTCGACGA ATACCAGGGG ATGCTGCAGG ACCTGCACGG CAGCCAGCTC
ATCTACTACG AGGATTTCGA CCGCGCGGCC GACGACGAGC CGTTTCTCGA CCGCTATCGC
GTCGATCACG CCGATCCGCT GTCGGCGCTG CTCGACGACC ACCTGCGCGA GGCGCTCGTC
GACGCGATCG ACCGGCTGCC CGAGCGCGAG AAGCTGCTGA TGTCGCTGTA CTACGAGCGC
GGGCTGAACT TGCGCGAGAT CGGCGCGGTG CTCGAGGTGA GCGAGTCGCG CGTGTGCCAG
CTGCACAGCC AGGCCGTCGC ACGCCTGCGC GCGCGGTTGC GCGAACAGGC GTGGGTCGGC
GCGGAGAATT GA
|
|---|
| Protein sequence | MYNAQGKMTQ ADVLAQYAPL VRRLGLQLVA KMPASVDLDD LIQAGMIGLM DAAGRYKEDQ
GAQFETYATQ RIRGAMLDEL RSNDWLPRSL RKTSREVEYA VHQVEQQLGR SASETEIAEH
LKMPLDEYQG MLQDLHGSQL IYYEDFDRAA DDEPFLDRYR VDHADPLSAL LDDHLREALV
DAIDRLPERE KLLMSLYYER GLNLREIGAV LEVSESRVCQ LHSQAVARLR ARLREQAWVG
AEN
|
|---|
| |