| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0174 |
|---|
| Symbol | |
|---|
| ID | 4308578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 206913 |
|---|
| End bp | 207995 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638147953 |
|---|
| Product | chemotaxis-specific methylesterase |
|---|
| Protein accession | YP_772069 |
|---|
| Protein GI | 115350230 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.51198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAGA TCAAAGTGTT GTGCGTCGAC GATTCGGCGC TGATCCGCAG CCTGATGACG
GAGATCATCA ACAGCCAGCC CGACATGACG GTGTGCGCGA CCGCGCCCGA TCCGCTCGTC
GCGCGCGATC TCATCAAGCA GCACAACCCG GACGTCCTGA CGCTGGACGT CGAAATGCCG
CGCATGGACG GGCTCGACTT CCTCGAGAAG CTGATGCGTC TGCGGCCGAT GCCGGTCGTG
ATGGTGTCGT CGCTGACCGA GCGCGGCTCC GAGATCACGC TGCGCGCGCT CGAACTCGGC
GCGGTGGATT TCGTCACGAA GCCGCGCGTC GGGATTCGCG ACGGCATGCT CGACTACGCG
GAAAAGCTCG CGGACAAGAT CCGCGCGGCG TCGCGCGCCC GCGTGCGCCA GACGCCGCAG
CCGCAGGCCG CCGCGCCCAC GGCGAGCGGC CAGCCGGCCG CGCCGATGAT CAACAACCCG
CTCGTCAGTA CCGAGAAGCT GATCATCATC GGTGCGTCGA CGGGCGGCAC CGAGGCGATC
CGCGAGGTGC TGACGCCGCT GCCGCCGGAT GCGCCGGCGG TGCTGATCGC GCAGCACATG
CCGCCCGGCT TCACCAAGTC GTTCGCGCAG CGGCTGAACG GCCTGTGCCG GATCGCGGTG
AAGGAAGCCG AGCACGGCGA ACGCGTGCTG CCGGGCCATG CGTACATCGC GCCGGGCCAC
GCGCACCTGC TGCTCGCGCG CAGCGGCGCG AACTACATCG CGCAGTTGTC CGACGAGCCG
CCGGTGAACC GTCACCGGCC GTCGGTCGAC GTGCTGTTCC GCTCGGCGGC GCAGCACGCG
GGCAAGAACG CGATCGGCGT GATCCTCACG GGGATGGGCC GCGACGGCGC GGCCGGCCTG
CTGGACATGA AGCGCGCGGG CGCGCACACG TTCGCGCAGG ACGAGGCGAG CTGCATCGTG
TTCGGGATGC CGCGCGAGGC GATCGCGCTC GGCGGGGCGG ACGAGGTCGT CTCGCTGGCC
GAGATGAGCC GGCGCGTGAT GGCGCGCCTG GCGACGATGG GCGATAGGGT GCAGCGCGTC
TGA
|
|---|
| Protein sequence | MQKIKVLCVD DSALIRSLMT EIINSQPDMT VCATAPDPLV ARDLIKQHNP DVLTLDVEMP
RMDGLDFLEK LMRLRPMPVV MVSSLTERGS EITLRALELG AVDFVTKPRV GIRDGMLDYA
EKLADKIRAA SRARVRQTPQ PQAAAPTASG QPAAPMINNP LVSTEKLIII GASTGGTEAI
REVLTPLPPD APAVLIAQHM PPGFTKSFAQ RLNGLCRIAV KEAEHGERVL PGHAYIAPGH
AHLLLARSGA NYIAQLSDEP PVNRHRPSVD VLFRSAAQHA GKNAIGVILT GMGRDGAAGL
LDMKRAGAHT FAQDEASCIV FGMPREAIAL GGADEVVSLA EMSRRVMARL ATMGDRVQRV
|
|---|
| |