| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0163 |
|---|
| Symbol | |
|---|
| ID | 4308567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 195021 |
|---|
| End bp | 196085 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638147942 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_772058 |
|---|
| Protein GI | 115350219 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.628752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTG CCCAGATCGC GCCGCTTTAC GAAGCTGTCC CGCCCAAACT CTACGGCGGC
ACCGAGCGTG TCGTGTCCTA CCTCACCGAG GCGCTCGTCG AGCTCGGCCA CGATGTGACG
CTGTTCGCCA GCGGCGACTC CGTCACGTCG GCCCGTCTCG AGGCGGCATG GCCGCGCGCC
CTGCGGCTCG ACCCGTCGAT CCGCGATTCG ATGGCGCCCC ATATGCGCCT GATCGAGCAG
GTCGCCCGTG TCGCGCATGA ATTCGACGTG CTGCACTTCC ACCTCGACTA CCTGCCGTTC
TCGCTGATGT CGCGCCTCGA CACGCCTTAC GTGACGACGC TGCACGGCCG CCTCGACCTG
CCGGAGCTGC AGCCGGTGTT CGACGCGTTC CCGAATTCGC CGGTCGTCTC GATCTCGAAT
TCGCAGCGCA AGCCGCTGCC GCAGGCCGCG TGGGCCGGCA CCGTTTATCA CGGGCTGCCC
GACACGCTGC TCACGCCGCA GCCGCACGTG AAGCCCGAAT ACCTCGCGTT CCTCGGTCGG
ATCTGTCCCG AAAAGCGGGT CGACACGGCG ATCCGGATCG CCGCGAAAAG CGGGCTGCCG
CTGAAGATCG CCGCGAAGGT CGACAAGGCC GACGCCGACT ACTTCAAGGA AGTGATCGAG
CCGCTGCTCG GCGAGGCGCA TGTCGAATTC ATCGGCGAGA TCAACGAGGC GCAGAAGCCC
GCGTTCCTGT CCGGCGCGAA AGCGCTGCTG TTCCCGATCG ACTGGCCGGA GCCGTTCGGC
CTGGTGATGA TCGAGGCGAT GGCCTGCGGC ACGCCGGTCG TCGCGTTCAA CCGCGGCTCG
GTGCCGGAAG TGATCGAGGA CGGCGTGACG GGCTTCATCG TCGAGGACGT GCAGGGCGCG
GTCGGCGCGC TGCACCGGAT CGACAGCCTG TCGCGCGACG CGATCCGCGC ACGCTTCGAT
ACGCGTTTCA GCTCGAAAGC GATGGCGCGC CGTTACGTCG AAACCTACGA ATCGCTTTGC
ACGGCGGCAA AACGGCCGAC CTTGCGCCAG GTCGCGGGCG CCTGA
|
|---|
| Protein sequence | MRIAQIAPLY EAVPPKLYGG TERVVSYLTE ALVELGHDVT LFASGDSVTS ARLEAAWPRA
LRLDPSIRDS MAPHMRLIEQ VARVAHEFDV LHFHLDYLPF SLMSRLDTPY VTTLHGRLDL
PELQPVFDAF PNSPVVSISN SQRKPLPQAA WAGTVYHGLP DTLLTPQPHV KPEYLAFLGR
ICPEKRVDTA IRIAAKSGLP LKIAAKVDKA DADYFKEVIE PLLGEAHVEF IGEINEAQKP
AFLSGAKALL FPIDWPEPFG LVMIEAMACG TPVVAFNRGS VPEVIEDGVT GFIVEDVQGA
VGALHRIDSL SRDAIRARFD TRFSSKAMAR RYVETYESLC TAAKRPTLRQ VAGA
|
|---|
| |