Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0160 |
Symbol | |
ID | 4308564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 192601 |
End bp | 193476 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638147939 |
Product | Cof-like hydrolase |
Protein accession | YP_772055 |
Protein GI | 115350216 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.53218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTC CGCAGCATCC TGCGCGCCAT TTCCCCGCTC CCATGTACAA AGTCATCGCC ACCGATCTCG ACGGCACTCT GCTGAACAGC GACCATCAGC TCGATCCGTA CACGATCGAG ACCGTCCGCC GGCTCGATCG CGACGGCCTG CAGTTCGTGA TCGCGACAGG CCGCCATTAC GCGGACGTCG CCGGCATCCG CGACGTGCTG GGCATCCGGC CGTACCTGAT CACGTCGAAC GGTGCGCGCG TGCATGCGCC GGACGACACG GCGATCCATG CGCAGGACAT CGACCCCGCG ATCGTCCGCG GCCTCGTGCA GCCGGGCGTG ACCGGCGCGC ACGGGCGCGT GATCGTCAAC CTGTTCACCG ACCGCGGCTG GCTGATCGAC CGCGAAGCGC CGCACCTGCT CGAATTCCAC CAGGATTCGG GTTTCCGGTA CGACGTGATC GACATGGCCG CGCACGACGG CGCGGACATC GCGAAGGTGC TGTACATCGG CGAGCCGGCC GATCTGGCGG TGGTCGCCGA GCAGATGCGC GTGCAGTTCG GCGATGCGCT GTACGTCACG TACTCGCTGC CCGACTGCCT CGAAGTGATG ACCGCGAACG TGTCGAAGGG CCGCGCACTG CGCGCGGTGC TCGCGCGGCT CGGCGTCGAT ACCGGCCACT GCATCGCGTT CGGCGACAAC ATGAACGACA TCGACCTGCT CGAAACGGCC GGTCACGCGT TCATGATGAA CAACGCGAAT CCCGACCTGA TCGCGCAGCT GCCGCACATC CCGCGGATCG GCAACAACTT CGACGCGGGC GTCGCCCGCC ACCTGCGCAC GCTGTTCTCG CTCGAGGACA CCGTCGACGG CGTCGCCGCT TCCTGA
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Protein sequence | MAVPQHPARH FPAPMYKVIA TDLDGTLLNS DHQLDPYTIE TVRRLDRDGL QFVIATGRHY ADVAGIRDVL GIRPYLITSN GARVHAPDDT AIHAQDIDPA IVRGLVQPGV TGAHGRVIVN LFTDRGWLID REAPHLLEFH QDSGFRYDVI DMAAHDGADI AKVLYIGEPA DLAVVAEQMR VQFGDALYVT YSLPDCLEVM TANVSKGRAL RAVLARLGVD TGHCIAFGDN MNDIDLLETA GHAFMMNNAN PDLIAQLPHI PRIGNNFDAG VARHLRTLFS LEDTVDGVAA S
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