Gene Bamb_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0158 
Symbol 
ID4310900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp190724 
End bp191329 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID638147937 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_772053 
Protein GI115350214 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.598967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGC GGTGCAACTG GGTAAAGACG GAAGCGGATG CTCACTATCA CGATACCGAG 
TGGGGCGTGC CGTCACATGA CGATCGCCAC CTGTTCGAAA TGCTGATTCT GGAAGGCGCG 
CAGGCGGGGC TGTCGTGGTC GACGATCCTG AACAAGCGCG CCGGCTATCG CGAGGCGTTC 
GCCGACTTCG ATGTCGACGC CGTCGCGCGC TTCACGCCGA AGCACATCGA GAAGCTGCTC 
GAGAATCCCG GCATCGTGCG CAATCGCGCA AAGGTCCAGT CCGCGGTGAC CAATGCACTG 
GCCGTGCAAC GCATTCGCGA CGAACACGGG TCGCTCGCGC ACTTCCTGTG GTCGTTCGTC 
GATCACATGC CGGTGCAGAA CGCCTGGCAG TCGTATCGCG ACGCGCCCGC GTCGACCGCC 
CAGTCGGACG CGCTCAGCAA GGCGCTGAAG GCGTATGGCT GCAAGTTCGT CGGCTCGACG 
ATCTGCTATG CGCTGATGCA GGCAACCGGG ATGGTCAACG ACCACGAGGC CGGCTGCCCG 
TGTCACGCCA AATGCGCGGC GCTCGGCGGC AAGCAGCAGC CGGCACGGCG CCGCAAGACC 
GGCTGA
 
Protein sequence
MSQRCNWVKT EADAHYHDTE WGVPSHDDRH LFEMLILEGA QAGLSWSTIL NKRAGYREAF 
ADFDVDAVAR FTPKHIEKLL ENPGIVRNRA KVQSAVTNAL AVQRIRDEHG SLAHFLWSFV 
DHMPVQNAWQ SYRDAPASTA QSDALSKALK AYGCKFVGST ICYALMQATG MVNDHEAGCP 
CHAKCAALGG KQQPARRRKT G