| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0148 |
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| Symbol | |
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| ID | 4310890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 175541 |
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| End bp | 177400 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638147927 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_772043 |
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| Protein GI | 115350204 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCGATG CCGGCCTCCG CGCGGTTGCG CGCTCCGTAC CGAACTCACG CTGGCTTACC
ACGATGACTG ATCTCACGCT GTCCGACTCC CCCGTCGCCA CGATCGAAGC GGCGCTGGCG
CACCACCAGG CCGACCGGCT CGAGGAAGCC GAGACGCTGT ACCGCCGGAT TCTCGACGCC
GAGCCGCGGC ACGCGGACGC GCTGCATCTG CTCGGCCTGA TCGGTCACCA GTACGGGCGC
TATCACGAGG CGACGGAACT GATCATGGCG GCGATCGAGA TCAAGCCCGA CGCGACCTAT
TACTACAACC TCGGCAACGT GATGCAGGCG AACAATCGGC CGGCCGCCGC CGCCGAGTGT
TTCCGCCTCG CGATCGAGCT GCGGCCCGGC TACGTCGACG CGTACAACAA CCTCGGCAAC
GCGCAGCGGC TCGCGGGCCA CGCACGCGAG GCCGTCGACG CGTTCTGCCA GGCGATCGCG
CTGCAGCCCG ACCACGGGCA GGCATACAAC AACCTCGGCA ACGCGCTGCT CGACCTGAAC
GAGATCCCGG CCGCGCTCGA GGCGTACCAG CACGCGGTTG CGCTGCGTCC GGAGCTGCCG
GAGCCGCGCA GCAACCTGCT GTTCGCGTAC CACTACAGCG ACGCGTTCGA CCCGCACGCG
TACCTCGACG AAGCCGCGCG CTTCGATGCG CTCGTCACGC AGCGCGCGCA GCCGTACTCG
ACGTGGCAGG TCGACCTGGG CGCGCGCATC GGGCGGCCGC TGCGCGTGGG CATCGTGTCG
GGCGACCTGA AGGCGCACCC GGTCGGCTAT TTCATCGAAG GGATGCTCGC GCACGTGAAG
CGCGAGCGCA TCGAACTGCA TGCGTATCCG ACGCGCGAGA TCGAGGACGA CGTGACCGCG
CGCATCAAGC CGCGCTTCGC GTCGTGGACG TGTATTGCCG GCCTCGACGA CGCGGCGGCT
GCCGCGCGCA TTCACGACGA CGGCATCGAC GTGCTGATCG ACGCATCCGG CCATACGATC
CACAACCGCC TGCCGCTGTT CGCGTGGAAG CCCGCGCCGC TGCAGGTGAG CTGGCCCGGT
TATTTCGCGA GCACCGGCAT GCGCGCGATC GACTACGTGC TCGGCGATCG CCACGTGATG
CCGGCCGACG AGGCCGCGCA TTTCGTCGAA CGCGCGTGGC ACCTGCCCGA TAGCTACTTG
TGCTTCACGC CGCCAGCTGT CGAGCTCGAC GGCGGCCCGC TGCCGATGCT CGCGAACGGT
TATCCGACCT TCGGCTATTT CGGCAAGCTC GCGAAGCTCA CCGATCACGT GATCGACGTA
TGGTCGCGCG TGCTGCGCGA CGTGCCGAAC GCACGACTGT TCGTGAAGGC GCCGCATCTC
GACGATCCGC GCGAGCAGGA CGCGCTCGCG GCCCGCTTCG CCGCGCACGG CATCGATGCG
GCGCGTCTGC TGTTCGAAGG CCGGTCGCCG CGCGACGAAT ATCTGGCCGC CTACCGGCGC
GTCGACCTGA TGCTGAGCCC GTTCCCGTAC CCGGGCGGCA CGACGACGGC CGAGGCGCTG
TGGATGGGCG TGCCCGTGCT TGGCCGCCGC GGCGCGCGGT TCCTGTCGCA CATCTGCGAA
AGCCTGCTGC AGGCGGCGCG CCTGCCCGAA TGGATCGCGG ACGACGACGA CGCGTATGTC
GCGAAGGCCG TCGCGTTCGC ACGCAATCCG GCCGAGCTGG CCGTGCTGCG CACGACGCTG
CGTGCGCAGG TGCTGGCGTC GCCGCTGTGC GATGCGCCCC GCTTCGCGCG TCATTTCGAG
GAGGCGCTGC ACGAAATGTG GGTGCGCCGC GTCGACGCCG CACCGGGAGC CGCAGCGTGA
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| Protein sequence | MCDAGLRAVA RSVPNSRWLT TMTDLTLSDS PVATIEAALA HHQADRLEEA ETLYRRILDA
EPRHADALHL LGLIGHQYGR YHEATELIMA AIEIKPDATY YYNLGNVMQA NNRPAAAAEC
FRLAIELRPG YVDAYNNLGN AQRLAGHARE AVDAFCQAIA LQPDHGQAYN NLGNALLDLN
EIPAALEAYQ HAVALRPELP EPRSNLLFAY HYSDAFDPHA YLDEAARFDA LVTQRAQPYS
TWQVDLGARI GRPLRVGIVS GDLKAHPVGY FIEGMLAHVK RERIELHAYP TREIEDDVTA
RIKPRFASWT CIAGLDDAAA AARIHDDGID VLIDASGHTI HNRLPLFAWK PAPLQVSWPG
YFASTGMRAI DYVLGDRHVM PADEAAHFVE RAWHLPDSYL CFTPPAVELD GGPLPMLANG
YPTFGYFGKL AKLTDHVIDV WSRVLRDVPN ARLFVKAPHL DDPREQDALA ARFAAHGIDA
ARLLFEGRSP RDEYLAAYRR VDLMLSPFPY PGGTTTAEAL WMGVPVLGRR GARFLSHICE
SLLQAARLPE WIADDDDAYV AKAVAFARNP AELAVLRTTL RAQVLASPLC DAPRFARHFE
EALHEMWVRR VDAAPGAAA
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