Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0148 |
Symbol | |
ID | 4310890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 175541 |
End bp | 177400 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638147927 |
Product | TPR repeat-containing protein |
Protein accession | YP_772043 |
Protein GI | 115350204 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGCGATG CCGGCCTCCG CGCGGTTGCG CGCTCCGTAC CGAACTCACG CTGGCTTACC ACGATGACTG ATCTCACGCT GTCCGACTCC CCCGTCGCCA CGATCGAAGC GGCGCTGGCG CACCACCAGG CCGACCGGCT CGAGGAAGCC GAGACGCTGT ACCGCCGGAT TCTCGACGCC GAGCCGCGGC ACGCGGACGC GCTGCATCTG CTCGGCCTGA TCGGTCACCA GTACGGGCGC TATCACGAGG CGACGGAACT GATCATGGCG GCGATCGAGA TCAAGCCCGA CGCGACCTAT TACTACAACC TCGGCAACGT GATGCAGGCG AACAATCGGC CGGCCGCCGC CGCCGAGTGT TTCCGCCTCG CGATCGAGCT GCGGCCCGGC TACGTCGACG CGTACAACAA CCTCGGCAAC GCGCAGCGGC TCGCGGGCCA CGCACGCGAG GCCGTCGACG CGTTCTGCCA GGCGATCGCG CTGCAGCCCG ACCACGGGCA GGCATACAAC AACCTCGGCA ACGCGCTGCT CGACCTGAAC GAGATCCCGG CCGCGCTCGA GGCGTACCAG CACGCGGTTG CGCTGCGTCC GGAGCTGCCG GAGCCGCGCA GCAACCTGCT GTTCGCGTAC CACTACAGCG ACGCGTTCGA CCCGCACGCG TACCTCGACG AAGCCGCGCG CTTCGATGCG CTCGTCACGC AGCGCGCGCA GCCGTACTCG ACGTGGCAGG TCGACCTGGG CGCGCGCATC GGGCGGCCGC TGCGCGTGGG CATCGTGTCG GGCGACCTGA AGGCGCACCC GGTCGGCTAT TTCATCGAAG GGATGCTCGC GCACGTGAAG CGCGAGCGCA TCGAACTGCA TGCGTATCCG ACGCGCGAGA TCGAGGACGA CGTGACCGCG CGCATCAAGC CGCGCTTCGC GTCGTGGACG TGTATTGCCG GCCTCGACGA CGCGGCGGCT GCCGCGCGCA TTCACGACGA CGGCATCGAC GTGCTGATCG ACGCATCCGG CCATACGATC CACAACCGCC TGCCGCTGTT CGCGTGGAAG CCCGCGCCGC TGCAGGTGAG CTGGCCCGGT TATTTCGCGA GCACCGGCAT GCGCGCGATC GACTACGTGC TCGGCGATCG CCACGTGATG CCGGCCGACG AGGCCGCGCA TTTCGTCGAA CGCGCGTGGC ACCTGCCCGA TAGCTACTTG TGCTTCACGC CGCCAGCTGT CGAGCTCGAC GGCGGCCCGC TGCCGATGCT CGCGAACGGT TATCCGACCT TCGGCTATTT CGGCAAGCTC GCGAAGCTCA CCGATCACGT GATCGACGTA TGGTCGCGCG TGCTGCGCGA CGTGCCGAAC GCACGACTGT TCGTGAAGGC GCCGCATCTC GACGATCCGC GCGAGCAGGA CGCGCTCGCG GCCCGCTTCG CCGCGCACGG CATCGATGCG GCGCGTCTGC TGTTCGAAGG CCGGTCGCCG CGCGACGAAT ATCTGGCCGC CTACCGGCGC GTCGACCTGA TGCTGAGCCC GTTCCCGTAC CCGGGCGGCA CGACGACGGC CGAGGCGCTG TGGATGGGCG TGCCCGTGCT TGGCCGCCGC GGCGCGCGGT TCCTGTCGCA CATCTGCGAA AGCCTGCTGC AGGCGGCGCG CCTGCCCGAA TGGATCGCGG ACGACGACGA CGCGTATGTC GCGAAGGCCG TCGCGTTCGC ACGCAATCCG GCCGAGCTGG CCGTGCTGCG CACGACGCTG CGTGCGCAGG TGCTGGCGTC GCCGCTGTGC GATGCGCCCC GCTTCGCGCG TCATTTCGAG GAGGCGCTGC ACGAAATGTG GGTGCGCCGC GTCGACGCCG CACCGGGAGC CGCAGCGTGA
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Protein sequence | MCDAGLRAVA RSVPNSRWLT TMTDLTLSDS PVATIEAALA HHQADRLEEA ETLYRRILDA EPRHADALHL LGLIGHQYGR YHEATELIMA AIEIKPDATY YYNLGNVMQA NNRPAAAAEC FRLAIELRPG YVDAYNNLGN AQRLAGHARE AVDAFCQAIA LQPDHGQAYN NLGNALLDLN EIPAALEAYQ HAVALRPELP EPRSNLLFAY HYSDAFDPHA YLDEAARFDA LVTQRAQPYS TWQVDLGARI GRPLRVGIVS GDLKAHPVGY FIEGMLAHVK RERIELHAYP TREIEDDVTA RIKPRFASWT CIAGLDDAAA AARIHDDGID VLIDASGHTI HNRLPLFAWK PAPLQVSWPG YFASTGMRAI DYVLGDRHVM PADEAAHFVE RAWHLPDSYL CFTPPAVELD GGPLPMLANG YPTFGYFGKL AKLTDHVIDV WSRVLRDVPN ARLFVKAPHL DDPREQDALA ARFAAHGIDA ARLLFEGRSP RDEYLAAYRR VDLMLSPFPY PGGTTTAEAL WMGVPVLGRR GARFLSHICE SLLQAARLPE WIADDDDAYV AKAVAFARNP AELAVLRTTL RAQVLASPLC DAPRFARHFE EALHEMWVRR VDAAPGAAA
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