| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0143 |
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| Symbol | |
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| ID | 4310885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 170389 |
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| End bp | 171597 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147922 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_772038 |
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| Protein GI | 115350199 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.331062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCTC CTCCCAATCT CGACCGCATT CCGTTCGGCC GTCCGTTCAT TGTCGGCAAG
GAGCTCTACT ACATCGCGAA GGCGGTCGAA CAGGGCGGAC TCGCCGGCGA CCAGGCATTC
ACGAAGCTGT GCCACCAGTG GCTGGAAACG CGCATCGGGT GCCATCGCGC GCTGCTCACG
CACTCGTGCA CGGCCGCGCT CGAGATGGCG GCGATCCTCA CCGACGTCGG CCCGGGCGAC
GAAGTCATCA TGCCGTCCTA TACGTTCGTG TCGACCGCCA ATGCGTTCGC GCTGCGCGGC
GCGACGCCCG TGTTCGTCGA CATCCGTGCC GATACGCTGA ATCTCGACGA AAAACTCGTT
GCCGCCGCGA TCACCGAGCG CACACGCGCG ATCGTCCCGG TCCACTATGC GGGCGTGTCG
TGCGACATGG ACACGATCGC GCACCTCGCC GACGACTACC GGCTGTGGGT CGTCGAGGAC
GCCGCGCAGG CGATCCAGTC GACCTGGAAG GGCAAGCCGC TCGGCAGCCT CGGCCACCTC
GCGTGCCTGA GCTTCCACGA GACCAAGAAC GTGATCGCCG GCGAAGGCGG GGCGCTGCTC
GTCAACGACG CGCGGCTCGT CGAGCGCGCG GAGATCATCC GCGAGAAAGG CACCAACCGC
AGCCAGTTCT TTCGCGGCCA GGTCGACAAG TACACGTGGG TCGACCTCGG TTCGTCCTAT
CTTCCCGGCG AATTGATCGC CGCGTTCCTG TACGCGCAGT TCGAGCACGC GGACGTGATC
ACCGCGCAGC GGCGCGCGAC CGTGAAGCGC TACGAGGATG CGCTGCGGCC GCTGCACGAC
GCCGGCCACC TCACGCTGCC CGCGACGCCG CTGAGCGAAG CTGGCAACGG CCATCTGTTC
TATTTCCTCG CGCGCGACCT CGGCGAGCGC ACCGCGCTGC TCGAGCGGAT CCGCGCCGCG
GGCGTGTTCG CCGTGTTCCA TTACGTGCCG CTGCACAGTT CGCCGGCGGG CCGCCACTAC
GGCCGCTGCG GCTCCGGCAT GCAGGTGACC GACGACGTCG CCGACCGGCT CGTGCGCCTG
CCGCTGTACC ACGCGATGAG CGACGCCGAG CAAGACCGTG TCCTTCAGGT GGTATCCGAC
TTCTACCGCA GCGGCGCGCG ACCGGCCGTC CGTCCTGCTT CGCCGCACCT CGAGCCCTCC
CTTTCATGA
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| Protein sequence | MFAPPNLDRI PFGRPFIVGK ELYYIAKAVE QGGLAGDQAF TKLCHQWLET RIGCHRALLT
HSCTAALEMA AILTDVGPGD EVIMPSYTFV STANAFALRG ATPVFVDIRA DTLNLDEKLV
AAAITERTRA IVPVHYAGVS CDMDTIAHLA DDYRLWVVED AAQAIQSTWK GKPLGSLGHL
ACLSFHETKN VIAGEGGALL VNDARLVERA EIIREKGTNR SQFFRGQVDK YTWVDLGSSY
LPGELIAAFL YAQFEHADVI TAQRRATVKR YEDALRPLHD AGHLTLPATP LSEAGNGHLF
YFLARDLGER TALLERIRAA GVFAVFHYVP LHSSPAGRHY GRCGSGMQVT DDVADRLVRL
PLYHAMSDAE QDRVLQVVSD FYRSGARPAV RPASPHLEPS LS
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