| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0131 |
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| Symbol | |
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| ID | 4309200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 153727 |
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| End bp | 156654 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638147909 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_772026 |
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| Protein GI | 115350187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG AACACCCGGA CCGTCTGATG AACCGCACGC CCCTCTCGCT CGCCGCGCTC
GAAACGCACG ACGCGTTCGC AGAACGCCAC ATCGGCCCCG ATGCCGCCAG CCAGCAGGCC
ATGCTCGACA CGCTCGGCTT CGCGTCGCGC GCCGCCCTGA TCGACGCCGT GATCCCGGCC
TCGATCCGCC GCGCCGAAAC GCTGCCGCTC GGCCCGTTCG CGCAGCCGAA GAGCGAGGCC
GAAGCCCTCG CCGCGCTGCG TGCCCTCGCG GACAAGAACC AGGTGTTCCG CTCATACATC
GGCCAGGGCT ATCACGACAC GCACACGCCG GCCGTGATCC TGCGCAACGT GCTCGAAAAC
CCGGCGTGGT ACACGGCCTA CACGCCGTAC CAGCCCGAAA TTTCCCAGGG TCGCCTCGAG
GCGCTCCTGA ACTTCCAGCA GATGGTCGCC GACCTCACGG GCCTCGCGAT CTCGAACGCA
TCGCTGCTGG ACGAAGCCAC CGCCGCGGCC GAAGCGATGA CGCTGCTGCA GCGCACCGGC
AAGCCGGCGT CGAACGTGTT CTACGTCGCC GACGACGTGC TGCCGCAGAC GCTCGAAGTG
ATCCGTACGC GCGCGCTGCC GGTCGGCATC GAAGTGAAGA CGGGCCCGGC AGCCGACGCC
GCGCAGGCCA ACGCGTTCGG CGTGCTGCTG CAATATCCGG GCGTCAACGG CGACGTGCGC
GACTACCGCG CGCTCACCGA AGCGATCCAC GCGGCCGGCG GCCATGTGGT CGTCGCGGCC
GACCTGCTCG CGCTGACCGT GCTGACGCCG CCCGGTGAAT GGGGCGCGGA CGTCGCCGTC
GGCAACACGC AGCGCTTCGG CGTGCCGATG GGCTTCGGCG GCCCGCACGC CGCGTATCTC
GCGGTGCGCG ACGAATTCAA GCGCCAGATG CCGGGCCGCC TCGTCGGCGT GACCGTCGAT
GCACAGGGCA AGCCCGCGCT GCGCCTCGCG CTGCAGACGC GCGAACAGCA CATCCGCCGC
GAGAAGGCGA CGTCGAACGT GTGTACCGCG CAAGCGCTGC TCGCGATCAT GGCGAGCATG
TATGCGGTCT ACCACGGCCC GCACGGCCTG AAGACGATCG CGCTGCGCGT GAACCGCATC
GCGGCGCTGT TCGCCGCCGG CGTGAAGCAG CTCGGCTTCG CGCCCATCAA CGACACGTTC
TTCGACACGC TGACGATCGA CACCGGCGCG CGCACCGCGC AGGTCCACGA ATTCGCGAAG
GCCCGCCGCA TCAACCTGCG CCGCGTGAGC GACACGCAAG TGGGCGTGTC GTTCGACGAA
ACGACGACCC GCGACGACCT CGCCGCTCTC CTCGCCGTGT TCGCGCAGGC CGCGGGCGGC
ACCGCACCGT CCGTTGACGC GCTGGACGCG GGCCTCGCCG GCGTCGCCGC GCTGCCGGCC
GGCCTCGAGC GCACGAGCGC GTACCTGACG CACCACGTGT TCAACCGCCA CCATTCCGAG
ACCGAAATGC TGCGCTACCT GCGCAGCCTG TCGGACAAGG ATCTCGCGCT CGATCGCTCG
ATGATCCCGC TCGGCTCGTG CACGATGAAG CTGAACGCAA CGTCGGAAAT GCTGCCCGTC
ACGTGGCCCG AGTTCGGCAG GATCCACCCG TTCGCGCCGG CCGAGCAGAC CGTCGGCTAC
CGCGAGATGA TCGACCAGCT CGAGCAGATG CTCGTCGCGG CCACCGGCTA CGCGGCCGTG
TCGCTGCAGC CGAACGCCGG CTCGCAGGGC GAATACGCGG GCCTGCTGAT CATCCACGCG
TACCACGCAT CGCGCGGCGA AGCGCATCGC GACGTGTGCC TGATCCCCGC TTCCGCGCAC
GGCACGAACC CGGCCTCCGC CCACATGGCC GGCATGAAGG TCGTGGTCGT CGCGTGCGAC
GCCCAGGGCA ACGTCGACAT CGCCGATCTC AAGGCGAAGG CCGAGCAGCA CGCGAACGAC
CTCGCGGCGA TCATGATCAC GTATCCGTCG ACGCACGGCG TGTTCGAGCA GAACGTGCGC
GAGATCTGCG AGATCGTCCA TGCGCACGGC GGCCAGGTGT ACGTCGACGG CGCGAACATG
AACGCGATGG TCGGCCTGAC CGCGCCGGGC CAGTTCGGCG GCGACGTGTC GCACCTGAAC
CTGCACAAGA CCTTCTGCAT CCCGCACGGC GGTGGCGGCC CGGGCGTCGG CCCGGTCGCG
GTCGGCCCGC ACCTCGCGAA GTTCCTGCCG AACCAGCGTT CGACCGGCTA CACGCGCGAA
GAAAACGGCA TCGGCGCGGT GTCGGCCGCG CCGTACGGCT CGGCGTCGAT CCTGCCGATC
TCGTGGATGT ACATCGCGAT GATGGGCGCG AAGAACCTGA CCGCCGCCAC CGAGACCGCG
ATCCTCAACG CGAACTACAT CGCGAAGCGC CTCGCGCCGC ACTACCCGGT GCTGTATTCG
GGCCCGGGCG GGCTGGTCGC GCACGAGTGC ATTCTCGACC TGCGCCCGAT CAAGGAAACG
AGCGGCATCA GCGTCGACGA CGTCGCCAAG CGCCTGATGG ACTACGGCTT CCACGCGCCG
ACGATGAGCT TCCCGGTGCC GGGCACGCTG ATGGTCGAGC CGACCGAATC TGAATCGCAG
GAAGAACTCG ACCGCTTCAT CGCCGCGATG ATCGCGATCC GCGAGGAAAT CCGCGCGGTC
GAGGAAGGCC GCGCCGATCG CGAGGACAAC CCGCTGCGTC ACGCGCCGCA TACGGCCGCC
GTCGTCACCG CGAACGAGTG GCCGCACGCG TACTCGCGCG AGCAGGCCGC GTACCCGGTC
GCATCGCTCG GCACGAACAA GTACTGGCCG CCGGTCGGCC GTGCGGACAA CGCTTACGGC
GACCGCAACC TGTTCTGCTC GTGCGTGCCG ATGTCGGACT ACGCATAA
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| Protein sequence | MKLEHPDRLM NRTPLSLAAL ETHDAFAERH IGPDAASQQA MLDTLGFASR AALIDAVIPA
SIRRAETLPL GPFAQPKSEA EALAALRALA DKNQVFRSYI GQGYHDTHTP AVILRNVLEN
PAWYTAYTPY QPEISQGRLE ALLNFQQMVA DLTGLAISNA SLLDEATAAA EAMTLLQRTG
KPASNVFYVA DDVLPQTLEV IRTRALPVGI EVKTGPAADA AQANAFGVLL QYPGVNGDVR
DYRALTEAIH AAGGHVVVAA DLLALTVLTP PGEWGADVAV GNTQRFGVPM GFGGPHAAYL
AVRDEFKRQM PGRLVGVTVD AQGKPALRLA LQTREQHIRR EKATSNVCTA QALLAIMASM
YAVYHGPHGL KTIALRVNRI AALFAAGVKQ LGFAPINDTF FDTLTIDTGA RTAQVHEFAK
ARRINLRRVS DTQVGVSFDE TTTRDDLAAL LAVFAQAAGG TAPSVDALDA GLAGVAALPA
GLERTSAYLT HHVFNRHHSE TEMLRYLRSL SDKDLALDRS MIPLGSCTMK LNATSEMLPV
TWPEFGRIHP FAPAEQTVGY REMIDQLEQM LVAATGYAAV SLQPNAGSQG EYAGLLIIHA
YHASRGEAHR DVCLIPASAH GTNPASAHMA GMKVVVVACD AQGNVDIADL KAKAEQHAND
LAAIMITYPS THGVFEQNVR EICEIVHAHG GQVYVDGANM NAMVGLTAPG QFGGDVSHLN
LHKTFCIPHG GGGPGVGPVA VGPHLAKFLP NQRSTGYTRE ENGIGAVSAA PYGSASILPI
SWMYIAMMGA KNLTAATETA ILNANYIAKR LAPHYPVLYS GPGGLVAHEC ILDLRPIKET
SGISVDDVAK RLMDYGFHAP TMSFPVPGTL MVEPTESESQ EELDRFIAAM IAIREEIRAV
EEGRADREDN PLRHAPHTAA VVTANEWPHA YSREQAAYPV ASLGTNKYWP PVGRADNAYG
DRNLFCSCVP MSDYA
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