| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0120 |
|---|
| Symbol | |
|---|
| ID | 4308594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 139984 |
|---|
| End bp | 140778 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638147898 |
|---|
| Product | ethanolamine ammonia-lyase small subunit |
|---|
| Protein accession | YP_772015 |
|---|
| Protein GI | 115350176 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4302] Ethanolamine ammonia-lyase, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.411933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CCGTCGAAAA GAATCCGTGG GCGCAGCTGA GGTCGTTCAC GAACGCGCGG
ATCGCGCTCG GCCGCGCGGG CAACAGCCTG CCGACCGCGC CGCTGCTCGC GTTCAACCTG
TCTCACGCGC AGGCGCGCGA CGCCGTGCAC CAGCCGCTCG ACGCGGACGC GCTGCGGCGT
GAGATCGAGG CGGCCGGCTT GCTGCCGACG CTCGGCGTGC AGAGCGCCGC GCCCGACCGC
GACCACTATC TGCGCCGGCC CGACCTCGGC CGCAAGCTGT CGGACGACAG CCGCGGGCTG
CTGGCCGGCT ACGGTGCGGC GCTCGACGAC GCGCCCGACG TGGTGTTCGT GGTCGGCGAC
GGGCTGTCGG CGTTCGCGGC CGCGAAGCAG GCGCTGCCGC TGCTGCAGGC CGTGCGGCCG
CGGCTCGACG CGGACGGCTG GCGAATCGGC CCGGTGGTGG TCGCGACGCA GGCGCGCGTC
GCCCTCGGCG ATGAGATCGG CGAGCTGCTG CGCGCGAAGG TCGTCGCGAT GCTGATCGGC
GAACGGCCGG GGCTCAGCTC ACCCGACAGT CTCGGCGTGT ACCTGACGTG GGCGCCGAAG
GTCGGCTGCC ACGACGCGCT GCGCAACTGC ATCTCGAACG TGCGGCCCGA AGGGCTCCCG
CATGCGGCCG CCGCGCACAA GCTGCATTAC CTGATGACGC ACGCGCGCCG GCTCGGGCTC
ACGGGTGTCG GGCTGAAGGA CGACAGCGAT GCGCTGCTGC CGCAGGCGGA CGCGGAGCGG
ATCGGTGCGG AATGA
|
|---|
| Protein sequence | MSDAVEKNPW AQLRSFTNAR IALGRAGNSL PTAPLLAFNL SHAQARDAVH QPLDADALRR
EIEAAGLLPT LGVQSAAPDR DHYLRRPDLG RKLSDDSRGL LAGYGAALDD APDVVFVVGD
GLSAFAAAKQ ALPLLQAVRP RLDADGWRIG PVVVATQARV ALGDEIGELL RAKVVAMLIG
ERPGLSSPDS LGVYLTWAPK VGCHDALRNC ISNVRPEGLP HAAAAHKLHY LMTHARRLGL
TGVGLKDDSD ALLPQADAER IGAE
|
|---|
| |