| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0117 |
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| Symbol | |
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| ID | 4308591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 135390 |
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| End bp | 136853 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147895 |
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| Product | TM helix repeat-containing protein |
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| Protein accession | YP_772012 |
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| Protein GI | 115350173 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCTT CCAGCTTCAT CACGTCGCTG CAGACCACGC TAGGCGGATA CCTGCCCAAG
ATCGCCGGTG CGATCGGCAT CCTGGTGATC GGCTGGCTGA TCGCCGTGGT GGTGCGGGCC
GGCACGCTCC GGCTGCTCAA CGCGCTGAAG GTCGATCAGC GGATCACCGA AAGCACCGGC
CAGGGCGCAC GCGTCGAGCG GATCATCGCC GGCGGGCTGT TCTGGCTCGT GCTGCTCGTC
ACCGCGGTGG GCATCTTCAA CGTGCTCAAC CTGTACGCGG TATCCAATCC GTTCTCGCTG
CTGGTCACGC ACATCGTCAA CTACCTGCCG AACCTGATCG GCGGCGCGGC GCTGACGCTG
ATCGCGTGGT TGATCGCGTC GCTGCTGCGC AGCCTCGCGA ACCGCGCGCT GCGAGCGAGC
AAGGTCGACG ACAAGCTGTC CGAAAGCGCG GGCATGCAGC CGATGAGCGG CTATCTCGGC
GACGTGCTGT TCTGGCTCGT GATCCTGATG TTCCTGCCGG CGATTCTCGG GTCGTTCGCG
CTGTCCGGCC TGCTGTCGCC GGTGCAGGGG ATGGTCGACA AGCTGCTCGC GATCGTGCCG
AACCTGTTCG CGGCCGCGGT GATTGGCGTC GTCGGCTGGA TCGTCGCGCG CGTGCTGCGC
GGCCTCGTGA CGAACCTGCT GGTCGCCGCC GGCGCCGACC GCCTCACCGC GAGTCTGGAC
AGCCCGACGC CGGTGCGCGT GTCGAGCCTG GTCGGCACCA TCGTCTACGT GTTCGTGTTC
GTGCCGACGC TGATCTCGGC GCTCGACGCG CTGAAGATCG ACGCGATCTC GATTCCCGCC
ACCAACATGC TGAACCAGTT TCTCGGCGCG GTGCCGGACA TCGTCGCGGC GATCGTGATC
GTGCTGGTCA CGTACTATTT CGCGCGCTTC GTCGCGTCGC TCGCGCAGCG GCTGCTGGAA
GCCGCCGGCG TCGACGGGCT GCCGGCCATG CTCGGCGTCG AGCGCGTGTT CTCGGGGATC
CTGCAGCCGT CGGTGCTGGT CGCGCGGCTG ATCGTGTTCT TCGCGATGCT GTTCGCGGCG
GTCGAGGCCG CGAACCGGCT CGGCTTCACG CAGGTGCGCG ACGTCGTCAC GCTGTTCATC
GAATTCGGCG GCCACGTGCT GATGGGCGGC GTGATCCTCG TGATCGGCGT GTGGCTCGCG
GGCCTCGCGC GCCGCGTGAT CGAGCAGGCC GACCGCGAAC ACAGCGTGCT GTTCGCGCGG
ATCGCGCAAT TCGCGATCCT CGGCCTCGTG TTCGCGATGG GGTTGCGCGC GATGGGCATC
GCCAACGAGA TCGTGCAGCT CGCGTTCGGC CTCGTGCTCG GTGCAATCGC GGTGGCGGTC
GCGCTGTCGT TCGGCCTCGG CGGCCGCGAA GCGGCCGGCA AGCTGCTCGA CCGCTGGTTC
AACCAGCGCG GCGGCGGCCA GTAA
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| Protein sequence | MDASSFITSL QTTLGGYLPK IAGAIGILVI GWLIAVVVRA GTLRLLNALK VDQRITESTG
QGARVERIIA GGLFWLVLLV TAVGIFNVLN LYAVSNPFSL LVTHIVNYLP NLIGGAALTL
IAWLIASLLR SLANRALRAS KVDDKLSESA GMQPMSGYLG DVLFWLVILM FLPAILGSFA
LSGLLSPVQG MVDKLLAIVP NLFAAAVIGV VGWIVARVLR GLVTNLLVAA GADRLTASLD
SPTPVRVSSL VGTIVYVFVF VPTLISALDA LKIDAISIPA TNMLNQFLGA VPDIVAAIVI
VLVTYYFARF VASLAQRLLE AAGVDGLPAM LGVERVFSGI LQPSVLVARL IVFFAMLFAA
VEAANRLGFT QVRDVVTLFI EFGGHVLMGG VILVIGVWLA GLARRVIEQA DREHSVLFAR
IAQFAILGLV FAMGLRAMGI ANEIVQLAFG LVLGAIAVAV ALSFGLGGRE AAGKLLDRWF
NQRGGGQ
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