| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0110 |
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| Symbol | |
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| ID | 4308584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 127715 |
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| End bp | 128560 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638147888 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_772005 |
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| Protein GI | 115350166 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCGG AGCACGCGCC GAAGCGCGGC GCCGGTCGAC AAGTCAGGAG ATTCACGATG
AAGCACGGAC ACACCCTGAA ACTCGCGTTC GCACTCGCAT GCGCGCTCGG CGCCGGTGCG
GCGTTCGCCG ACGGCCAGAC CCTGCGTTTC GGCCTGGAGG CGCAATACCC GCCGTTCGAA
TCGAAGGCGC CGAACGGCGA CCTGCAGGGC TTCGACATCG ACGTCGGCAA CGCCGTTTGC
CAGAGCGCGA AGCTGTCGTG CAAGTGGGTC GAGACGTCGT TCGACGGATT GATTCCCGCG
CTCAAAGGTC GCAAGTTCGA CGCGATCAAC TCGGCGATGA ATGCGACCGA ACAGCGGCGT
CAGGCGATCG ACTTCACGAC GATCATCTAC CGCGTGCCGA CGCAACTGAT CGCGCGCACC
GGCAGCGGCC TGCTGCCGAC GCCGGAATCG CTGAAGGGCA AGCGCGTCGG CGTGCTGCAG
GCGTCGATCC AGGAAACCTA CGCGAAGGCG CACTGGGAGC CGGCCGGCGT GTCGATCGTC
GCGTACCAGG ACCAGAACCA GGCGTACGCG GATCTCGTGG CGGGCCGCGT CGACGCGACG
CTGGTGCTCG CGCCGGCCGG CCAGCGCGGC TTCCTGTCCC GTCCGGACGG CAAGGGCTTC
GCGTTCGTCG GGCAGCCGGT GCGCGACGAC AAGATTCTCG GCAGCGGGAT CGCGTTCGGC
CTGCGCAAGG GCGACGACGC GCTGAAGGCG AAGCTCGATG CGGCGATCGA CAAGCTGAAG
GCGGACGGCA CGGTGAAGTC GCTCGGCCAG AAGTACTTCG GCGACATCGA CATTTCTACC
CGGTAA
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| Protein sequence | MGPEHAPKRG AGRQVRRFTM KHGHTLKLAF ALACALGAGA AFADGQTLRF GLEAQYPPFE
SKAPNGDLQG FDIDVGNAVC QSAKLSCKWV ETSFDGLIPA LKGRKFDAIN SAMNATEQRR
QAIDFTTIIY RVPTQLIART GSGLLPTPES LKGKRVGVLQ ASIQETYAKA HWEPAGVSIV
AYQDQNQAYA DLVAGRVDAT LVLAPAGQRG FLSRPDGKGF AFVGQPVRDD KILGSGIAFG
LRKGDDALKA KLDAAIDKLK ADGTVKSLGQ KYFGDIDIST R
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