Gene Bamb_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0108 
Symbol 
ID4308582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp125600 
End bp126268 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content73% 
IMG OID638147886 
ProductTetR family transcriptional regulator 
Protein accessionYP_772003 
Protein GI115350164 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCGC GACATGTTCA GGTTCCGGCG CCGCCCGGCC AGCCGGCGGC GCAACCCGCG 
CCCGCGTTGC GCCGCCGGCC GCGCCAGTCG CGCGCGCAGG CCACGTCCGA CGCGCTTCAG 
CAGGCCTTCG TTCAGCTTTT GCTCGAGCGC GGCTACGCGA AGGCGACGAT CCGCGAGATC 
GCGGCCGTCG CGGGCGTAAG CATCGGCACC TTCTATGAAT ACTTCGGCGA CAAGCAGAGC 
CTCGCCGCGC TGTGCATCCA CCGGCGCGTG CAGGCGCTGG CAGACCGGCT GCGCGACGCG 
GCGCACGGCT TGGGCGGCGC GCCGCGCGCC GAACTCGCGG CCGCGCTGGT GGATGTGCAG 
GTCGATGCGA TCGGCGCCGA CGCCGCACTG TGGGGCGCTT TCTTCGCGCT GGAGCGGCAG 
GTGTCGCCGC TCGCTGCGTA TCGCCGGCAT TACGACGCGT ATGTCGCGCT GTGGCGCGAC 
GCGTTCGCGC AGGCCGCCGA TCCGCCGCCG GCCGCGCGGC TCGACGGGGT CGCCCGGATG 
GCGCATACGA TCTGCTACGG CGGCGTGTCG CAGGCGCTGC TCACGCTCGG GCCCTCGCTC 
GATTTCATCG CACTGCGCGC CGAGCTTCAG GCCGTGCTGC GCGCCTATCT GGCGGCCGCA 
GGCGAGTGA
 
Protein sequence
MPPRHVQVPA PPGQPAAQPA PALRRRPRQS RAQATSDALQ QAFVQLLLER GYAKATIREI 
AAVAGVSIGT FYEYFGDKQS LAALCIHRRV QALADRLRDA AHGLGGAPRA ELAAALVDVQ 
VDAIGADAAL WGAFFALERQ VSPLAAYRRH YDAYVALWRD AFAQAADPPP AARLDGVARM 
AHTICYGGVS QALLTLGPSL DFIALRAELQ AVLRAYLAAA GE