Gene Bamb_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0105 
Symbol 
ID4311233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp122160 
End bp122828 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID638147883 
Product(Acyl-carrier-protein) phosphodiesterase 
Protein accessionYP_772000 
Protein GI115350161 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCT TGCTGCATAT CGAATCGTCC CCGCGCAAGT CGCGGTCCGC ATCGCTCGAC 
GTCGCGCACG CGTATCTCGA CGCCTGGCGC GACGCGCATC CGGAGCATCG GGTCGACGTG 
CTCGACCTGT GGGCGACGCA CTTGCCCGAA CTCGACGGCG ATGCGCTCGA TGCCAAATAC 
GCGGACTTGA GCGGCACGCC GCTCAGCGAA GGCCAGCAGC AAGCGTGGGC AGGTTTTCGG 
CGGCTGGCGC AGCGGATGCA CGACGCGGAT ACGCTGTTGT TCTCCGTGCC GCTGTGGAAT 
TTTTCCATCC CCTACAAGCT CAAGCATTTC ATCGATGCCG TGTCCCACCG CGGCATCCTG 
TTCTCATATG ACGAGCGCGG GTTGGCGGGA TTGCTGAACC GCAAGAAAGC CGTCGTGATC 
TATGCGAGAG GCCTCGACTA TTCAAGGCAG TCGAGCACGC CCGCCGAGTC GTTCGACTTT 
CAGCGGCCGT TTCTCGAAGC GTGGCTGCGC TTCATCGGTA TCACGGACAT CGAATCGATC 
GTCGTCGAGA AAACACTGTT TGGACCTGAA ATCGATCACG CGGGCAGAGA GGCTGCGCGC 
GAACGGGCCG TGACGCTGGC ACACGCGGCT TCGTCATCAT CGGCAGCGTC GGCTTCGGTT 
GACGGCTGA
 
Protein sequence
MPTLLHIESS PRKSRSASLD VAHAYLDAWR DAHPEHRVDV LDLWATHLPE LDGDALDAKY 
ADLSGTPLSE GQQQAWAGFR RLAQRMHDAD TLLFSVPLWN FSIPYKLKHF IDAVSHRGIL 
FSYDERGLAG LLNRKKAVVI YARGLDYSRQ SSTPAESFDF QRPFLEAWLR FIGITDIESI 
VVEKTLFGPE IDHAGREAAR ERAVTLAHAA SSSSAASASV DG