| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0104 |
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| Symbol | |
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| ID | 4311232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 120839 |
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| End bp | 121978 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638147882 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_771999 |
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| Protein GI | 115350160 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACA CGATGAAAAA GGTGGCAGGC GCGACGTTCG TCGCTGTCAT GTCGCTGGCG
GGGACGGCCC ATGCGGACGA CGTGAAGATC GGTTACGCAG GGCCGATGAC GGGCGCCCAG
GCTCACTACG GCAAGGATAT GCAGAACGGG ATCGCGCTCG CGCTGGAAGA CTTCAACGCG
ACGAACCCGA AGATCGGCGG CAAGCCGGTG AAGTTCATGC TCGAGACGCA GGACGACCAG
GCTGACCCGC GCACCGGCAC GACGGTTGCG CAGAAGCTCG TCGATGACGG CATCAAGGGC
ATGCTCGGCC ACTTCAACTC GGGCACGACG ATCCCGGCCT CGCGCATCTA CGCGAACGCC
GGCATTCCGG AAATCGCGAT GGCGACGGCG CCGGAATACA CGCAGCAGGG TTACAAGACG
ACCTTCCGCA TGATGACGTC CGACACGCAG CAGGGCTCGG TGGCGGGCAC GTTCGCGTCG
AAGGATCTCG GCATGAAGAA GATCGCGATC GTCGACGACC GCACGGCTTA CGGCCAGGGT
CTCGCCGACC AGTTCGAGAA GGCTGCGAAG GCCGGCGGCG CGACGATCGT CGACCGTGAG
TTCACGAACG ACAAGGCCGT CGACTTCAAG GCGATCCTGA CCAAGCTGAA GGCGGCGAAG
CCGGATCTCG TCTACTACGG CGGCGCGGAT TCGCAGGCAG CGCCGATGGT CAAGCAGATG
AAGGCGCTCG GCATGAGCGC ACCGTTGATG AGCGGCGAAA TGGTGAAGAC GCCGACGTTC
CTGAAGATCG CGGGCAACGC GGCCGAAGGC ACGATCGCAT CGCTGGCGGG CCTCCCGCTC
GACGAAATGC CGGGCGGCAA GTCGTACGCG GAGAAGTACA AGAAGCGCTT CGGCGAAGAC
GTGCAGACCT ACTCGCCGTA CGCATACGAC GGCGCGATGG CGATGCTGAA CGCGATGAAG
AAGGCCGATT CGACCGATCC GGCGAAGTAC CTGCCGGTGC TCGCGAAGAC CGACATGGCC
GGCGTCACGT CGACCCACGT CGCGTACGAC GCGAAGGGCG ACCTGAAGAA CGGCGGCATC
ACGATGTACA AGGTCGAGAA GGGCGAGTGG AAGCCGCTGA AGAGCATCGG CGGCAAGTAA
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| Protein sequence | MQHTMKKVAG ATFVAVMSLA GTAHADDVKI GYAGPMTGAQ AHYGKDMQNG IALALEDFNA
TNPKIGGKPV KFMLETQDDQ ADPRTGTTVA QKLVDDGIKG MLGHFNSGTT IPASRIYANA
GIPEIAMATA PEYTQQGYKT TFRMMTSDTQ QGSVAGTFAS KDLGMKKIAI VDDRTAYGQG
LADQFEKAAK AGGATIVDRE FTNDKAVDFK AILTKLKAAK PDLVYYGGAD SQAAPMVKQM
KALGMSAPLM SGEMVKTPTF LKIAGNAAEG TIASLAGLPL DEMPGGKSYA EKYKKRFGED
VQTYSPYAYD GAMAMLNAMK KADSTDPAKY LPVLAKTDMA GVTSTHVAYD AKGDLKNGGI
TMYKVEKGEW KPLKSIGGK
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