| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0095 |
|---|
| Symbol | |
|---|
| ID | 4311223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 104388 |
|---|
| End bp | 105929 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638147873 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_771990 |
|---|
| Protein GI | 115350151 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.88314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA ATCCCTCTGA GATCAGCGAG CTGATCAAGA GCCGGATCCA GGGCCTTGAA
GCGAGCGCAG ACGTTCGCAA CCAGGGCACC GTGATCTCCG TGACCGACGG TATCGTGCGC
ATCCACGGCC TGTCGGACGT GATGCAGGGC GAAATGCTCG AGTTTCCGGG CAACACGTTC
GGCCTCGCGC TGAACCTCGA GCGCGACTCG GTCGGCGCTG TGATTCTCGG CGAATACGAA
CACATCTCGG AAGGCGACGT CGTCAAGACG ACGGGCCGCA TTCTCGAAGT TCCGGTGGGT
CCGGAACTCG TCGGCCGCGT GGTCGACGCG CTCGGCAACC CGATCGACGG CAAGGGCCCG
GTCAACGCGA AGCTGACCGA CGCGATCGAA AAGATCGCTC CGGGCGTGAT CTGGCGTAAG
TCGGTGTCGC AGCCGGTGCA GACGGGCATC AAGTCGATCG ACGCGATGGT GCCGATCGGC
CGTGGCCAGC GTGAGCTGAT CATCGGCGAC CGTCAGTGCG GCAAGACCGC GGTGGCGATC
GACGCGATCA TCAACCAGAA GGGCAAGGAC CTGGTCTGTA TCTACGTCGC GATCGGCCAG
AAGGCTTCGT CGATCATGAA CGTGGTGCGC AAGCTCGAAG AAACGGGCGC GATGGAATAC
ACGATCGTCG TCGCCGCTTC GGCTTCGGAT TCGGCCGCGA TGCAATACCT CGCACCGTAC
GCCGGCTGCA CGATGGGCGA ATACTTCCGC GACCGCGGTC AAGACGCGCT GATCATCTAT
GACGACTTGA CCAAGCAAGC CTGGGCATAC CGTCAGATCT CGCTGCTGCT GCGCCGCCCG
CCGGGCCGTG AAGCCTACCC GGGTGACGTG TTCTATCTGC ACTCGCGTCT GCTCGAGCGT
GCTGCTCGCG TGTCGGAAGA GTACGTCGAG AAGTTCACGA ACGGCGAAGT GAAGGGCAAG
AGCGGCTCGC TGACGGCACT GCCGGTCATC GAAACGCAGG CTGGCGACGT GACCGCGTTC
GTTCCGACGA ACGTGATCTC GATCACCGAC GGCCAGATCT TCCTGGAAAC CGACCTGTTC
AACGCAGGCA TCCGCCCGGC AATCAACGCC GGCGTGTCGG TGTCGCGAGT CGGTGGCGCC
GCTCAGACGA AGGTCGTGAA GAAGCTGTCG GGCGGTATCC GTACCGACCT CGCGCAGTAC
CGTGAACTGG CCGCATTCGC GCAGTTCGCA TCGGACCTCG ACGAAGCGAC CCGCAAGCAG
CTCGAGCGCG GCCGCCGCGT GACGGAACTG CTGAAGCAGC CGCAGTACCA GCCGCTGCAG
GTGTGGGAAC TGGCCGTGTC GCTGTACGCC GCGAACAACG GCTACCTCGA CGATCTCGAC
GTGAAGCAAG TGCTCCCGTT CGAGAAGGGC CTGCGCGACA ACCTGAAGAC CAGCCACGCT
GACCTCATCA AGCGCATCGA AGACACCAAG GATCTCTCGA AGGACGACGA AGGCGCGCTG
CGCGCGGCGA TCGAGTCCTT CAAGAAGTCG GGTGCCTATT GA
|
|---|
| Protein sequence | MQLNPSEISE LIKSRIQGLE ASADVRNQGT VISVTDGIVR IHGLSDVMQG EMLEFPGNTF
GLALNLERDS VGAVILGEYE HISEGDVVKT TGRILEVPVG PELVGRVVDA LGNPIDGKGP
VNAKLTDAIE KIAPGVIWRK SVSQPVQTGI KSIDAMVPIG RGQRELIIGD RQCGKTAVAI
DAIINQKGKD LVCIYVAIGQ KASSIMNVVR KLEETGAMEY TIVVAASASD SAAMQYLAPY
AGCTMGEYFR DRGQDALIIY DDLTKQAWAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVSEEYVE KFTNGEVKGK SGSLTALPVI ETQAGDVTAF VPTNVISITD GQIFLETDLF
NAGIRPAINA GVSVSRVGGA AQTKVVKKLS GGIRTDLAQY RELAAFAQFA SDLDEATRKQ
LERGRRVTEL LKQPQYQPLQ VWELAVSLYA ANNGYLDDLD VKQVLPFEKG LRDNLKTSHA
DLIKRIEDTK DLSKDDEGAL RAAIESFKKS GAY
|
|---|
| |