Gene Bamb_0090 details

Gene Information

• Locus tag: Bamb_0090
• ID: 4311218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 101356
• End bp: 101898
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638147868
• Product: F0F1-type ATP synthase subunit I-like protein
• Protein accession: YP_771985
• Protein GI: 115350146
• COG category: [C] Energy production and conversion
• COG ID: [COG3312] F0F1-type ATP synthase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000624383
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGGAAAA TTGCGATGGC GGGTCAGGCG CCGAACGACA GGCACGATGA TCACCGAGCG 
CAACGCAGCG CTTCAGCGGC CGGCGAACGG CGCGAGTCCG ATGCCGACGA CTGGGATGCC 
GAGCAGCAAG ATAACAACAT CGTTCCGCTC ACGCGGACGG AAGCCGAGAG GCTGTTCGGT 
CCGAACGTGA GCAAGCCGTC GCGCGTGACC CCCTCCAAGG TGGTGGCCGC GCAGGTGGTC 
TTGTCCCTGG TTGCAACGCT GGCGTGGTGG CTGTTTTCAA AGTCGCCGGG CGCCGCTGCG 
CAGTCCGCGT TTCTGGGCGG GGCGATCGGC TGGGTGCCAA GCGCGTTGTT CGTGGCACGA 
CTGAAGGCAG GTGGCACGGC CACCGTCATG AGCTGGGTGA TGGGCGAAGC CCTGAAACTC 
GGCCTGACGA TCGGGATGTT CGCAGCAGTG GCGTTCGGCT GGGCCGGCGT GCACTGGGTG 
CCGTTCCTGG TCACGTACCT CGTCGTGCTG AAGACGTACT GGATCGCACT GGCCTGGCGG 
TAA 

 

Protein sequence

MRKIAMAGQA PNDRHDDHRA QRSASAAGER RESDADDWDA EQQDNNIVPL TRTEAERLFG 
PNVSKPSRVT PSKVVAAQVV LSLVATLAWW LFSKSPGAAA QSAFLGGAIG WVPSALFVAR 
LKAGGTATVM SWVMGEALKL GLTIGMFAAV AFGWAGVHWV PFLVTYLVVL KTYWIALAWR