| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0085 |
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| Symbol | gidB |
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| ID | 4308735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 97212 |
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| End bp | 97898 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638147863 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_771980 |
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| Protein GI | 115350141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.446759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGC GTCGCGCGCC GGCGGTTAAT CGGGACGTAC TTGAACAGAT GCTCGTCGAC
GGCACGGCCG CGCTCGACAT CGCATTGACG GATGCACAAC GCAACCAGCT GCTCGACTAT
GTCGCGCTGC TCGGCAAGTG GAACGCGGTC TACAACCTGA CTGCGATCCG CGACCCGAAG
CAGATGCTGA TCCAGCACAT TCTCGATTCG CTCTCCATCG TTCCGCATCT GCGCGACCGT
GCATCGGCGC GCGTGCTCGA CGTGGGTTCG GGCGGCGGCC TGCCCGGCAT CGTGCTGGCG
ATCGTCCGGC CGGACTGGCA GGTGACGTTG AACGATATCG TGCAGAAAAA GTCTGCATTC
CAGACGCAAA TGCGCGCGGA GCTGAAGCTC GCGAACCTGT CGGTCGTCAC GGGGCGGGTC
GAATTGCTGC AGCCGGGTGT CGACGTGCCG GAAAAATTCG ACATGATCGT GTCCCGCGCC
TTCGCGGATC TATCCGACTT CGTTAAACTT GCTCGTCATC TCGTCGCACC CGGCGGATCG
ATCTGGGCAA TGAAGGGTGT TCACCCGGAC GACGAAATTG CACGACTGCC GGAAGGCAGC
CGCGTAAAGC AGACGATGCG GCTTGCAGTA CCGATGCTCG ATGCCGAACG GCACCTGATC
GAGGTGATCG TCGACGAGGC GAATTGA
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| Protein sequence | MTARRAPAVN RDVLEQMLVD GTAALDIALT DAQRNQLLDY VALLGKWNAV YNLTAIRDPK
QMLIQHILDS LSIVPHLRDR ASARVLDVGS GGGLPGIVLA IVRPDWQVTL NDIVQKKSAF
QTQMRAELKL ANLSVVTGRV ELLQPGVDVP EKFDMIVSRA FADLSDFVKL ARHLVAPGGS
IWAMKGVHPD DEIARLPEGS RVKQTMRLAV PMLDAERHLI EVIVDEAN
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