| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0082 |
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| Symbol | |
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| ID | 4308732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 92197 |
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| End bp | 93981 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638147860 |
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| Product | ABC transporter related |
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| Protein accession | YP_771977 |
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| Protein GI | 115350138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.999385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGA TGGTACGCAA CAAGACCTTC TGGGTGTTTC TCGTGGTGCT GTTCGCGCTG
CCGGTGCTGC CCGGCGCGCT GCAGGTGCCC GAATACTGGA TCACGCTGCT GAACTACATC
GGCCTCTACG CGATCGTCGC GATCGGGCTC GTGCTGCTGA CGGGTGTCGG CGGGATGACG
AGTTTCGGGC AGGCCGCGTT CGTCGGCATC GGCGCGTATG CGACGGCGTT CCTGACGACG
CGATACGGCG TGTCGCCGTG GCTCGCGCTG ATCGTCGGCG TCGTGCTGAC GGCGCTCGTC
GCGCTGGTGC TGGGTGCGGT CACGATGCGG CTGTCCGGGC ACTTTCTGCC GCTCGGCACG
ATCGCATGGG GCCTCGCGCT CTTCTATCTG TTCGGCAACC TCGAGCTGCT CGGCAAGTAC
GACGGGATCA ACGGGATTCC GGCGCTGAAC CTGTTCGGCA TCGAGCTCGG CAGCGGCCGC
AGCCTGTACT TCCTGATCTG GGCCGTCGTG CTGGCGGCGA TCGTGTCGGT GCAGAACCTG
CTCAACAGCC GCCCCGGCCG CGCGATCCGC GCGCTGCGCG GCGGCGGTGT GATGGCCGAG
GCGATGGGCG TGAACACCGC ATGGATGCGC GTCGTGATCT TCGTCTACGC GGCCGTGCTC
GCCGCGGTAT CGGGCTTCCT GTACGCGCAC CTGCAGCGCG CGGTGAACCC GACCCCGTTC
GGGCTGAACC ACGGGATCGA ATTCCTGTTC ATGGCCGTGG TCGGCGGCGT GTCGCACGTG
TGGGGCGCGG TGCTCGGTGC GGCGATCCTC ACCGTGCTGC AGGACTACCT GCAGACGCTG
CTGCCGAAGC TGCTCGGCTC GGAAGGCAAC TTCGAGATCA TCGTGTTCGG CGTGCTGATG
GTGCTGCTGC TGCAGTACGC GCGCCAGGGC GTGTGGCCGT TCGTCGCGAA GCTGTTTCCG
CGCGGGCCGC GCGCCCATGT GCCCGACCAG GCCGATCCGC TGCCGCAGCG CGCGAAACCT
GTGGCCGGCG AGCCGCTGCT CGTCGTCGAC AACGCGCGCA AGCAGTTCGG CGGGCTGGTG
GCCGTCAACG ACGTGAGTTT CGACGTGAAG GCGGGGCAGA TCATCGGCCT GATCGGCCCG
AATGGTGCCG GCAAGTCGAC CACGTTCAAC CTCGTGACCG GCGTGCTGCA GCCGACCGGC
GGCACGATCA CGTTCCGTGG TGAGCGGATC GACGGGCTCA CGTCGCGGCA GATCGTCCGG
CGCGGAATCG GCCGTACGTT CCAGCACGTG AAGCTGCTGC CGACGATGAC GGTGCTCGAG
AATGTCGCGA TCGGCGCGCA TCTGCGCGGC CATACGGGCG TATGGCGCAG CATCGCGCGG
CTCAACGCGC ACGAGGAGGC GCAACTGCTG GCTGAAGCGG CACGGCAGAT CCGCCGCGTC
GGCCTCGAAA AGCACATGTA CGACGAAGCC GGCAGCCTCG CGCTCGGCCA GCAGCGGATT
CTCGAAATCG CCCGCGCGCT GTGCTGCGAC CCGATGCTGC TGCTGCTCGA CGAGCCGGCC
GCCGGGCTGC GCTACCAGGA GAAGCAGCAA CTCGCCGATC TGTTGCGGCG GCTGAAGGCC
GAAGGGATGA GCGTGTTGCT CGTGGAACAT GACATGGATT TCGTGATGAA TCTCACCGAC
CGGCTGGTGG TGATGGAATT CGGCACGCGG ATCGCGGAAG GGCTGCCGCA GGACGTGCAG
CAGGATCCGG CGGTGCTCGA AGCGTATCTG GGCGGGGTGG AGTGA
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| Protein sequence | MKTMVRNKTF WVFLVVLFAL PVLPGALQVP EYWITLLNYI GLYAIVAIGL VLLTGVGGMT
SFGQAAFVGI GAYATAFLTT RYGVSPWLAL IVGVVLTALV ALVLGAVTMR LSGHFLPLGT
IAWGLALFYL FGNLELLGKY DGINGIPALN LFGIELGSGR SLYFLIWAVV LAAIVSVQNL
LNSRPGRAIR ALRGGGVMAE AMGVNTAWMR VVIFVYAAVL AAVSGFLYAH LQRAVNPTPF
GLNHGIEFLF MAVVGGVSHV WGAVLGAAIL TVLQDYLQTL LPKLLGSEGN FEIIVFGVLM
VLLLQYARQG VWPFVAKLFP RGPRAHVPDQ ADPLPQRAKP VAGEPLLVVD NARKQFGGLV
AVNDVSFDVK AGQIIGLIGP NGAGKSTTFN LVTGVLQPTG GTITFRGERI DGLTSRQIVR
RGIGRTFQHV KLLPTMTVLE NVAIGAHLRG HTGVWRSIAR LNAHEEAQLL AEAARQIRRV
GLEKHMYDEA GSLALGQQRI LEIARALCCD PMLLLLDEPA AGLRYQEKQQ LADLLRRLKA
EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQDVQ QDPAVLEAYL GGVE
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