Gene Bamb_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0080 
Symbol 
ID4308730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp89778 
End bp90935 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID638147858 
Productextracellular ligand-binding receptor 
Protein accessionYP_771975 
Protein GI115350136 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGA ATCGATGGAT GGAGGCTCTG CTTGCCGCGG GCCTCGTGTG TGCGGCGGCC 
ACGGCGTCGG CACAGGTGAA GATCGGCGTG ACGCTGTCGG CCACCGGGCC GGCCGCATCG
CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC
GTCCAGTACA TCGTCCTCGA CGATGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC
AAGCTGATCG ACGAGGATCA CGTCGACGCG ATCATCGGTT CGTCCGTCAC GCCGAATTCG
CTCGCGATGC TCGATCCGGT GTCGCAGGGC AAGACACCGA CGATCTCGCT CGCGGCGAGC
GCGCAGATCA TCGCGCCGAT GGACGCGAAG CGCGCGTGGA TGTTCAAGGT GCCGCAGAAC
GACCAGCTGA TGGCCGATGC GATCGCCGGC TACATGGCGA AGCACGGCGT GAAGACGATC
GGCTTCATCG GCTTCGCCGA CGCGTACGGC GACAGCTGGT ACAACACGTT CAACGCGGCC
GCGGCGAAGA ACGGGTTGAA GGTCGTGTCG AACGAGCGCT ACAACCGCAC CGACGCGTCG
GTGATGGGGC AGGTGCTGAA GCTGCTGGGC TCGAATCCCG ACGCGGTGCT GATCGCCGGT
TCCGGCACGC CGGCCGCGCT GCCGGCCAAG ACGCTCAAGG AGCGCGGCTA CAAGGGCAAG
GTGTACCAGA CGCACGGCGT CGCGAACAAC GACTTCCTGC GCGTGTGCGG CAAGGATTGC
GAAGGCGAGA TCCTGCCGGC CGGCCCGGTG CTCGTGACCG ACCAGCTGCC CGATTCGAAT
CCGGTGAAGA AGCCGGCACT CGGCTACAAG GCTGCGTACG AGAAGGCATA CGGCGCGGGC
TCGCTGTCGA CCTTCGGCGG GCATGCGTGG GATGCGGGGC TGCTGCTGCA GCGCGCGATT
CCCGACGCGC TGAAGAAGGG CCAGCCGGGC ACCGAGGCGT TCCGCGAGGC GCTGCGCGCG
TCGCTCGAGA GCGTGAAGGA CCTGCCCGTG TCGCACGGCG TGATCAACAT GACGTCGACC
GACCACAACG GCTTGGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG
AAGCTGCAGG CCGAGTAA
 
Protein sequence
MKMNRWMEAL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS 
VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPTISLAAS
AQIIAPMDAK RAWMFKVPQN DQLMADAIAG YMAKHGVKTI GFIGFADAYG DSWYNTFNAA
AAKNGLKVVS NERYNRTDAS VMGQVLKLLG SNPDAVLIAG SGTPAALPAK TLKERGYKGK
VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG
SLSTFGGHAW DAGLLLQRAI PDALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTST
DHNGLDTRAR VMVQIVDGKW KLQAE