Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0080 |
Symbol | |
ID | 4308730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 89778 |
End bp | 90935 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638147858 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_771975 |
Protein GI | 115350136 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.217295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGA ATCGATGGAT GGAGGCTCTG CTTGCCGCGG GCCTCGTGTG TGCGGCGGCC ACGGCGTCGG CACAGGTGAA GATCGGCGTG ACGCTGTCGG CCACCGGGCC GGCCGCATCG CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC GTCCAGTACA TCGTCCTCGA CGATGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC AAGCTGATCG ACGAGGATCA CGTCGACGCG ATCATCGGTT CGTCCGTCAC GCCGAATTCG CTCGCGATGC TCGATCCGGT GTCGCAGGGC AAGACACCGA CGATCTCGCT CGCGGCGAGC GCGCAGATCA TCGCGCCGAT GGACGCGAAG CGCGCGTGGA TGTTCAAGGT GCCGCAGAAC GACCAGCTGA TGGCCGATGC GATCGCCGGC TACATGGCGA AGCACGGCGT GAAGACGATC GGCTTCATCG GCTTCGCCGA CGCGTACGGC GACAGCTGGT ACAACACGTT CAACGCGGCC GCGGCGAAGA ACGGGTTGAA GGTCGTGTCG AACGAGCGCT ACAACCGCAC CGACGCGTCG GTGATGGGGC AGGTGCTGAA GCTGCTGGGC TCGAATCCCG ACGCGGTGCT GATCGCCGGT TCCGGCACGC CGGCCGCGCT GCCGGCCAAG ACGCTCAAGG AGCGCGGCTA CAAGGGCAAG GTGTACCAGA CGCACGGCGT CGCGAACAAC GACTTCCTGC GCGTGTGCGG CAAGGATTGC GAAGGCGAGA TCCTGCCGGC CGGCCCGGTG CTCGTGACCG ACCAGCTGCC CGATTCGAAT CCGGTGAAGA AGCCGGCACT CGGCTACAAG GCTGCGTACG AGAAGGCATA CGGCGCGGGC TCGCTGTCGA CCTTCGGCGG GCATGCGTGG GATGCGGGGC TGCTGCTGCA GCGCGCGATT CCCGACGCGC TGAAGAAGGG CCAGCCGGGC ACCGAGGCGT TCCGCGAGGC GCTGCGCGCG TCGCTCGAGA GCGTGAAGGA CCTGCCCGTG TCGCACGGCG TGATCAACAT GACGTCGACC GACCACAACG GCTTGGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG AAGCTGCAGG CCGAGTAA
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Protein sequence | MKMNRWMEAL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPTISLAAS AQIIAPMDAK RAWMFKVPQN DQLMADAIAG YMAKHGVKTI GFIGFADAYG DSWYNTFNAA AAKNGLKVVS NERYNRTDAS VMGQVLKLLG SNPDAVLIAG SGTPAALPAK TLKERGYKGK VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG SLSTFGGHAW DAGLLLQRAI PDALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTST DHNGLDTRAR VMVQIVDGKW KLQAE
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