Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0078 |
Symbol | |
ID | 4308728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 87696 |
End bp | 88670 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638147856 |
Product | inner-membrane translocator |
Protein accession | YP_771973 |
Protein GI | 115350134 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGAA AAGTGCTCTA CGGCGTGCTG CTCGCCGCAC TGCTCGCCGC GCCGTTCATC GGCGCGTATC CGGTCTTCGT GATGAAGGTG CTCACGTTCG CGCTGTTCGC GGCCGCGTTC AACCTGCTGA TCGGCTATAC GGGGCTGCTG TCGTTCGGCC ATGCGATGTT CCTCGCGACC GCCGGCTACG GCACCGGTTA TACGATCCAG ACGCTCGGCT TCACGCCGGA GCTCGGCGTG CTCGTCGGCA CGTTCGCCGC GACGCTGCTC GGGCTCGTCG TCGGGCTGTT CGCGATCCGG CGACAGGGCA TCTACTTCGC GATGATCACG CTCGCGTTCG CGCAGATGGT CTACTTCATC TACCTGCAGG CGCCGTTCAC GCGCGGCGAG GACGGCCTGC AGGGCGTGCC GCGCGGCCAC CTGTTCGGGC TCGTCGACCT GTCGAACGAC GTCGCGCTCT ACTACGTCGT GCTCGCGGTG ATCGTGGCCG CGTGCGCGTT CATCGTGCGA ATCGTGCACT CGCCGTTCGG CCAGGTGCTC GTCGCGATCA AGGAGAACGA GGCGCGTGCG ATCTCGCTCG GCTACGACAC CGATCGCTTC AAGCTGCTCG CGTTCATCCT GTCGGCCGGG CTCGCGGGGC TGGCCGGTTC GCTGAAGGTG CTGGTGCTCG GCTTCGAGAC GCTGTCCGAC GCGCACTGGA CGATGTCGGG CCTCGTCGTG CTGATGACGC TCGTCGGCGG GATGGGCACG CTGTTCGGGC CGTTGCTCGG CGCGGCGCTG ATCGTCGCGC TGGAGGACCG GCTCGGCGAC ATCGGCGAAT GGCTCGCCTC GGTCACCGGG ATCGGCTGGT TCCACTCGCT CGGCGAGTCG ACGACGATCG TCACGGGGCT GATCTTCATC GCGTGCGTGC TGGCATTCCG GCGCGGGATC GTCGGCGAGA TGGTCGCGCG GGTCAAGACG CTCAGGCCGT CCTGA
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Protein sequence | MQRKVLYGVL LAALLAAPFI GAYPVFVMKV LTFALFAAAF NLLIGYTGLL SFGHAMFLAT AGYGTGYTIQ TLGFTPELGV LVGTFAATLL GLVVGLFAIR RQGIYFAMIT LAFAQMVYFI YLQAPFTRGE DGLQGVPRGH LFGLVDLSND VALYYVVLAV IVAACAFIVR IVHSPFGQVL VAIKENEARA ISLGYDTDRF KLLAFILSAG LAGLAGSLKV LVLGFETLSD AHWTMSGLVV LMTLVGGMGT LFGPLLGAAL IVALEDRLGD IGEWLASVTG IGWFHSLGES TTIVTGLIFI ACVLAFRRGI VGEMVARVKT LRPS
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