| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0073 |
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| Symbol | |
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| ID | 4308723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 81776 |
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| End bp | 83461 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638147851 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_771968 |
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| Protein GI | 115350129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTACTC AACGTACGCT CGAGGGCGAA TTCGATTACG TGATCGTCGG CGCGGGCACC
GCGGGCTGCG TGCTCGCGAA CCGCCTGACC GAGGATCCCG AGATCCGCGT GCTGCTGCTC
GAGGCGGGCG GCAAGGACGA CTATCACTGG ATCCACATCC CGGTCGGCTA TCTGTACTGC
ATCGGCAATC CGCGCACCGA CTGGCTGTAC AAGACGCAGC CCGAGGCGGC GCTCAACGGC
CGCGCGCTGT CGTATCCGCG CGGCCGCGTG CTCGGCGGCT GCTCGTCGAT CAACGGGATG
ATCTACATGC GCGGCCAGCG CGAGGATTAC GACAGCTGGG CGCAGGAAAC CGGCGACGCC
GGCTGGTCGT GGGACAGCGT GCTGCCGATC TTCAAGCGCA GCGAAGACCA CCACGCGGGC
GCGAGCGATG CGCACGGCGC GGGCGGCTAC TGGCGCGTCG AGAAGCAGCG GCTGCGCTGG
GAGATCCTCG AATCGTTCGC GCAGGCCGCG CAGCAGACGG GCATCCCCGC GACCGACGAT
TTCAACCGCG GCGACAACAC CGGGGTCGGC TATTTCGAAG TGAACCAGAA GCGCGGCGTG
CGCTGGAATA CGTCGAAGGC GTTCCTGCGG CCCGCGATGA CGCGCCCGAA CCTGACCGTC
ATCACCGGCG CGCACGCGCA GCGCGTGATC TTCGACGGGC GGCGCGCAGT CGGCGTCGAG
TATCGCGGCG GCGGCACCGA CTACGTCGCG CACGCGCGCG CCGAAGTGCT GCTGACTTCC
GGCGCGGTGA ATTCGCCGCA GCTGCTCGAA CTGTCCGGCA TCGGCGCGGG CGCACGGCTG
CAGGCGCTCG GCATCGACGT CGTGCAGGAT CTGCCTGGTG TTGGCGAGAA CCTGCAAGAT
CATCTGCAAT TGCGGATGGC GTTTCGCGTC GATGGCGTGC GCACGCTCAA CACGCTGTCC
GCGCACTGGT GGGGCAAGCT GATGATCGGC GCCGAATATG CGCTGCTGCA GCGCGGGCCG
ATGTCGATGG CGCCGTCGCA GCTCGGCGCG TTCGCGAAGT CCGATCCGGA CGATCCCGCG
CTCACGCGCC CCGATCTCGA ATATCACGTG CAGCCGCTGT CGCTCGAACG CTTCGGCGAG
CCGCTGCACG CGTTCAACGC GTTTACGGCG TCCGTCTGCC ATCTGCGGCC GAGCTCGCGC
GGCAGCGTGC ACATCGCGAG CCCCGATGCG GGCGTCGCGC CGTCGATCGC GCCTAACTAC
CTGTCGACCG ACCACGATCG TCATGTCGCC GCGAACGCAC TGCGCCTCAC GCGCCGGATC
GCATCCGCGC CGGCGCTCGC GCGCTATCGT CCGGAGGAGA TCCTGCCGGG CACGCAGTAT
CGGACCGAAG CCGAACTGAT CGATGCGGCG GGCGCGATCG GCACCACGAT CTTCCATCCG
GTCGGCACGT GCCGGATGGG GCGCGCGGAC GACGAACGGG CCGTCGTCGA CAGCCGGCTG
CGCGTGCGGG GCGTCGCGGG GCTGCGGATC GTCGATGCAT CGGTGATGCC GTTCATCACG
TCCGGCAACA CGAATTCGCC GACGCTGATG ATCGCCGAGC GCGCGAGCGA CATGATCCGA
GCCGATCGAC GCGCGGCGCA TGAAGCGACG CACGTGCGAA CGGAAGCGGT GGTGACGGCT
GCGTGA
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| Protein sequence | MSTQRTLEGE FDYVIVGAGT AGCVLANRLT EDPEIRVLLL EAGGKDDYHW IHIPVGYLYC
IGNPRTDWLY KTQPEAALNG RALSYPRGRV LGGCSSINGM IYMRGQREDY DSWAQETGDA
GWSWDSVLPI FKRSEDHHAG ASDAHGAGGY WRVEKQRLRW EILESFAQAA QQTGIPATDD
FNRGDNTGVG YFEVNQKRGV RWNTSKAFLR PAMTRPNLTV ITGAHAQRVI FDGRRAVGVE
YRGGGTDYVA HARAEVLLTS GAVNSPQLLE LSGIGAGARL QALGIDVVQD LPGVGENLQD
HLQLRMAFRV DGVRTLNTLS AHWWGKLMIG AEYALLQRGP MSMAPSQLGA FAKSDPDDPA
LTRPDLEYHV QPLSLERFGE PLHAFNAFTA SVCHLRPSSR GSVHIASPDA GVAPSIAPNY
LSTDHDRHVA ANALRLTRRI ASAPALARYR PEEILPGTQY RTEAELIDAA GAIGTTIFHP
VGTCRMGRAD DERAVVDSRL RVRGVAGLRI VDASVMPFIT SGNTNSPTLM IAERASDMIR
ADRRAAHEAT HVRTEAVVTA A
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