| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0051 |
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| Symbol | |
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| ID | 4308719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 59218 |
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| End bp | 60717 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638147829 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_771946 |
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| Protein GI | 115350107 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.582006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACG TGCTCGCGTC CTCGACCCAG GACGGCGCGC CGGGCGAACG GCAGCCGCCG
TCACCGCTCG CCGCGCGCCT GTTGCCGTAC GGCTTCGCGA AGAGCGGCCA GGTACTGATC
GCGCATCAGC TCGACGACAC GCTCGAGGTG TGGATCAGCG AGCGCACGAA CGATGCGGCG
CTCGCCGAAA TCGCGCGCAA CTTCGGCTCG ATTTCCGTGC ACCGCGTGCC GGCCGACGAG
CTCGCGCAGG CGATCAACCA GGCGTACGCG CGCCAGGACG GCAGCGCCGC GCAGGTCGTC
GGCGAGGTCG AAGGCGAAGT CGACCTGTCG CGACTGATGC AGGACATCCC CGAAGTCGAA
GATCTGCTCG AATCGGAAGA CGACGCGCCG ATCATCCGGA TGATCAACGC GCTGCTCACG
CAAGCGGCGC GCGAACAGGC ATCGGACATT CACATCGAGC CGTTCGAGAA CGCGTCGGTC
GTGCGGTTTC GCGTCGACGG CACGCTGCGC GACGTCGTGC GGCCGAAGAA GGCGCTGCAC
GGCGCGCTGA TCTCGCGGAT CAAGATCATG GCGCAGCTCG ACATCGCCGA GAAACGCCTG
CCGCAGGACG GCCGCATCAC GCTGCGCGTC GGCGGCCGGC CGGTCGACGT GCGGGTGTCG
ACGCTGCCGA CCGGGCACGG CGAGCGCGCG GTGCTCCGTC TGCTGGAAAA GGATGCGCAG
CGCCTGAACC TCGAAGCGCT CGGGATGGGC CGCGACACGC TCGTCCAGTT CGACAAGCTG
ATCGGCCGCC CGCACGGGAT CGTGCTGGTG ACGGGCCCGA CCGGCTCGGG CAAGACGACC
ACGCTCTATG CGTCGATGTC GCGGCTCGAA ACGGCGACGA CCAACATCAT GACCGTCGAG
GATCCGATCG AATACGACCT GTCCGGCATC GGCCAGACGC AGGTGAACGA GCGGATCGGG
ATGACCTTTG CCCGTGCGCT GCGTTCGATC CTGCGTCAGG ATCCGGACGT GATCATGATC
GGCGAAATCC GTGACCTCGA AACCGCGCAG ATCGCGGTGC AGGCCTCGCT CACGGGCCAC
CTCGTGCTCG CGACGCTGCA CACCAACGAT GCGGCCTCGG CCGTCACGCG CCTGACCGAC
ATGGGCGTCG AGCCGTACCT GCTCGCGTCG TCGCTGCTCG GCGTGCTCGC GCAGCGTCTG
GTGCGCCAGC TCTGCCCAGC CTGCAAGGAA GAGCGGCACG AGGACGGCCG CACCGTGTGG
CATCCGGTCG GCTGCGACCG GTGCGGACAT TCGGGCTATG CGGGCCGGCG GGGGGTATAC
GAACTGCTGC TGATCGACGA TTCGATCCGC GCGCTGATCC ACCGCAACGC GGCCGATGCG
GAGATTCTCG CCACGGGCCG CGCACAAGGG ATGCGCACGC TGCGCGACGA CGCCGAGCGC
TGGCTCGCGG CCGGCGCGAC GTCGCTCGAG GAAGTGCTGC GCGTGACGGG AGGCGCATAG
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| Protein sequence | MSNVLASSTQ DGAPGERQPP SPLAARLLPY GFAKSGQVLI AHQLDDTLEV WISERTNDAA
LAEIARNFGS ISVHRVPADE LAQAINQAYA RQDGSAAQVV GEVEGEVDLS RLMQDIPEVE
DLLESEDDAP IIRMINALLT QAAREQASDI HIEPFENASV VRFRVDGTLR DVVRPKKALH
GALISRIKIM AQLDIAEKRL PQDGRITLRV GGRPVDVRVS TLPTGHGERA VLRLLEKDAQ
RLNLEALGMG RDTLVQFDKL IGRPHGIVLV TGPTGSGKTT TLYASMSRLE TATTNIMTVE
DPIEYDLSGI GQTQVNERIG MTFARALRSI LRQDPDVIMI GEIRDLETAQ IAVQASLTGH
LVLATLHTND AASAVTRLTD MGVEPYLLAS SLLGVLAQRL VRQLCPACKE ERHEDGRTVW
HPVGCDRCGH SGYAGRRGVY ELLLIDDSIR ALIHRNAADA EILATGRAQG MRTLRDDAER
WLAAGATSLE EVLRVTGGA
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