Gene Bamb_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0046 
Symbol 
ID4308714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp55929 
End bp56330 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content68% 
IMG OID638147824 
Productgeneral secretion pathway protein I 
Protein accessionYP_771941 
Protein GI115350102 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTC GCCCGCCCTT CCCGGCTTCC GGCTCCCGAG GCTTCACGAT GATCGAGGTG 
CTGGTCGCGC TCGCGATCAT CGCGGTCGCG CTCGCCGCGT CGATCCGCGC GGTCGGCACG 
ATGGCGAACA ACGCATCCGA TCTCCACCAC CGGCTGCTGG CCGGGTGGAG CGCCGACAAC 
GCGCTCGCGC AGCTGCGGCT CACGCATGCG TGGCCGGAAG TCGGCGAGCA GAGTTTCGAT 
TGTTCGCAAG GCAACGTGCA GATGGTCTGC ACGCAGCGCG TGCGCACGAC GCCGAACCCG 
GTGTTCCGGC GCGTGCAGAT TTCGGTGAGC ATGCCGGGGC ATCCCGGCGT GCTCGCGCAA 
ATGGTGACGG TGGTCGCGAA TGAAACCAGC CGTCCGCTCT GA
 
Protein sequence
MRRRPPFPAS GSRGFTMIEV LVALAIIAVA LAASIRAVGT MANNASDLHH RLLAGWSADN 
ALAQLRLTHA WPEVGEQSFD CSQGNVQMVC TQRVRTTPNP VFRRVQISVS MPGHPGVLAQ 
MVTVVANETS RPL