| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0045 |
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| Symbol | |
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| ID | 4308713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 55247 |
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| End bp | 55951 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638147823 |
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| Product | putative general secretion pathway protein J |
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| Protein accession | YP_771940 |
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| Protein GI | 115350101 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAG CCGTCCGCTC TGACGCGCCG ATGCGGCGTC GGCCCATGCG TTTCGCCGGC
TCGCGCCGCG TGCGCGGCTT CACGCTGATC GAACTGATGA TCGCGATCGC GATCCTCGCG
GTGGTCGCGA TCCTCGCGTG GCGCGGGCTC GACCAGATCA TGCGCGGCCG CGACAAGGTC
GCGTCCGCGA TGGAAGACGA GCGTGTGTTC GCGCAGATGT TCGACCAGAT GCGCATCGAC
GCGCGGCTCG CCGCGACCGA CGACGAAGCC GGCCAGCCGG CGATCGGCGT CGCCGGCAAT
ACGCTGCAGA TCGTCCGCAC GCTCGACTTG GCCGGCGCCG CGCCGCGGCT GCAGGTGGTC
CGCTACCGGA TCGCCGGCGG GCGCGTCGTG CGCTATGCAT CGCCGCCGCT CGCCGATGCG
AACCGCTTGC GCGACGTGCT GAAGGACAGC GGCGTCGACG GCTGGAGCTG GGTCGCGCTG
ATGGGCGGCG TCGGTGCGAT CGACGCGAAG CTGTACGTGC CGCGCGTCGG CTGGACTACC
AACCTGCAGA CGGCCAACGA CGCGCTGGCG CAGAACAACG ATGCGCTGAA GGTGCCGCAG
ATCGGCAACG CGCCGCCGAC ACGCGCGGTG ACGGGGCTGC AGGTCAGCAT CGGCGCGACG
TCGCTGCGCG TGCCCGTCAC GCGCATCTTC CTCGTCGGGG AATGA
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| Protein sequence | MKPAVRSDAP MRRRPMRFAG SRRVRGFTLI ELMIAIAILA VVAILAWRGL DQIMRGRDKV
ASAMEDERVF AQMFDQMRID ARLAATDDEA GQPAIGVAGN TLQIVRTLDL AGAAPRLQVV
RYRIAGGRVV RYASPPLADA NRLRDVLKDS GVDGWSWVAL MGGVGAIDAK LYVPRVGWTT
NLQTANDALA QNNDALKVPQ IGNAPPTRAV TGLQVSIGAT SLRVPVTRIF LVGE
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