Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0034 |
Symbol | |
ID | 4309661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 44513 |
End bp | 45235 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638147812 |
Product | LrgB family protein |
Protein accession | YP_771929 |
Protein GI | 115350090 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.306981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCGC TATTGTCCAG CCTGTCCGTC GACCACGTGA ATACGGCGAT TTCCGTCGGC TGCTTCGTGC TGACGGTCGT CCTGTATTTC GCGTCGAAGC GGCTCTACGC GTACAAGAAG ACGCTGCTGT TCTCGCCGCT CGTGTTCGTG CCGGGCGTGC TGGTGCTGCT CGTGTTGCTG ACCGGCATCC CGTATTCGGT CTACTTCCGC GACACGCGCT GGCTGATGTG GCTGCTCGGC CCGGCGACGA TCGCGTTCGC GGTGCCGATC TACGAATATC GCGAGCTGAT CCGTCGCCAC TGGCTGTCGC TGTCGGTCGG CGTGGCGGTC GGGATCGGCG CGGGCGTGTG CGGATCGCTG CTGCTCGCGA AGCTGCTGCA CCTGTCGCCC GAACTGCAGC GCTCGCTGAT GACGCGCTCG GTGTCGACCC CGTTTGCGCT CGCCGTGTCC GACAAGATCC ATGCGCCGAA AGACCTCACC GCGCTCTTCG TGATCGCGAC CGGCATCTGC GGGATGCTGC TCGGCGAGAT CGTGCTCGCG CTGGTGCCGA TGCGCACACG GCTCGCGCGC GGCGCGCTGT TCGGCGCGGC CGCCCACGGC GTGGGCACCG CGAAGGCGCG CGAGATCGGC AATGAGGAAG GCGTCGTGTC GAGCCTCACG ATGATGATCG CGGGCGTCGC GATGGTGCTG ATCGCGCCGC TGCTGTCGCT GCTGCCGATC TGA
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Protein sequence | MPALLSSLSV DHVNTAISVG CFVLTVVLYF ASKRLYAYKK TLLFSPLVFV PGVLVLLVLL TGIPYSVYFR DTRWLMWLLG PATIAFAVPI YEYRELIRRH WLSLSVGVAV GIGAGVCGSL LLAKLLHLSP ELQRSLMTRS VSTPFALAVS DKIHAPKDLT ALFVIATGIC GMLLGEIVLA LVPMRTRLAR GALFGAAAHG VGTAKAREIG NEEGVVSSLT MMIAGVAMVL IAPLLSLLPI
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