| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0021 |
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| Symbol | |
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| ID | 4309648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 33326 |
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| End bp | 34555 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638147799 |
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| Product | outer membrane protein (porin)-like protein |
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| Protein accession | YP_771916 |
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| Protein GI | 115350077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATGCG TCGGCCTCTC GCTGTGGTCG GCGACATTCG GCATACATTA CGTACTGCCA
ACGAACAGAT TTCAATGCGG CAGCTCGGAG GAGACGATCT TGAAACGAAA AACCCTTGCC
CTTTCCATCG CGGCGGCTGG CCTGTGCGCC GGCACCCACG CGCATGCGCA ATCGAGCGTG
CAACTCTACG GGCTGATGGA CCTGAGCTTT CCGACCTACC GGACCCACGC CGACGCGAAC
GGCAAACATG TGATCGGAAT GGGCAACGAA GGCGAGCCGT GGTTCAGCGG CAGCCGCTGG
GGCCTCAGAG GCGCTGAAGA CATCGGCGGC GGCACGAAGA TCATCTTCCG CCTCGAAAGC
GAATTCGTGG TCGCCAACGG CCAGATGGAA GACGAAGGCC AGATCTTCGA CCGCGACGCC
TGGGTCGGCG TCGAGGACGA ACGTTTCGGC AAGCTGACGG CCGGCTTCCA GAATACGATC
GCGCGCGACT CAGCGGCGAT CTACGGCGAC GCATACGGCT CCGCGAAGCT GACCACCGAG
GAAGGCGGCT GGACCAACTC GAACAACTTC AAGCAGATGA TCTTCTACGC GGCCGGCCCG
ACCGGCACGC GCTACAACAA CGGCCTCGCG TGGAAGAAGC TGTTCAGCAA CGGCATCTTC
GCGAGCGCCG GCTATCAGTT CAGCAACTCG ACCGCGTTCG CGACGGGTTC CGCCTACCAG
CTCGCGCTCG GTTACAACGG CGGGCCGTTC AACGTGTCGG GCTTCTATAA CCACGTGAAC
CACAACGGCT TCAGGAACCA GACGTTCTCG GTCGGCGGCA ACTATACGTT CAGCATCGTG
CGCCTGAACG CCGGCTACTT CCGCTACAAC GGCGACCAGG GCTCGCTCGG CCAGCGTCAC
GACGATTCGT GGACCGTGTC GGTGAAAGTC GCGCCGAAGG GCGCGCTCGA CTACGAGCTC
GGCTACCAGC AGATGCGGGT CAAGAACGCC GCGAACAACG CCGACGGCTT CACGCCGAAC
GCGAACCTCG GCACGTTCAG CCTGACCAAC GGTGTCGGCA ACGGCTTCAA GGAGACGATC
TACGGGTCGG TGTTCTACCA CCTGAGCAAG CGCACCGAGG TGTACCTGGC CGGCGACTAC
ATGCGCCTGC ACGGCGGCTA CACGGTGGCG TCGACGTTCG GCGCGCAAAA CCAGCTCGAA
CTCACGTCGG GCATCCGCAC GCGCTTCTGA
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| Protein sequence | MLCVGLSLWS ATFGIHYVLP TNRFQCGSSE ETILKRKTLA LSIAAAGLCA GTHAHAQSSV
QLYGLMDLSF PTYRTHADAN GKHVIGMGNE GEPWFSGSRW GLRGAEDIGG GTKIIFRLES
EFVVANGQME DEGQIFDRDA WVGVEDERFG KLTAGFQNTI ARDSAAIYGD AYGSAKLTTE
EGGWTNSNNF KQMIFYAAGP TGTRYNNGLA WKKLFSNGIF ASAGYQFSNS TAFATGSAYQ
LALGYNGGPF NVSGFYNHVN HNGFRNQTFS VGGNYTFSIV RLNAGYFRYN GDQGSLGQRH
DDSWTVSVKV APKGALDYEL GYQQMRVKNA ANNADGFTPN ANLGTFSLTN GVGNGFKETI
YGSVFYHLSK RTEVYLAGDY MRLHGGYTVA STFGAQNQLE LTSGIRTRF
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