| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0019 |
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| Symbol | |
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| ID | 4309455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 27912 |
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| End bp | 30947 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638147797 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_771914 |
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| Protein GI | 115350075 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGC ATTTCGAAGC GGATCTCGAC TACCAGCGCG AGGCGATCGA CGCCGTCTGC
GACCTGTTTC GCGGCCAGGA ATCGTATCGC GGCGACTTCA GCGTGCTCGC GAACGCCGCG
CCCGGCACGA CGGCCGCCGC GCAAGGCTCG CTCGGCTTCG CGGTGTCGGA GCAAGGCGTC
GGCAACCGGC TGTCGCTGAC CGACGACGCG CTCGCGCGCA ATCTCGCCGA CGTGCAGCTG
CGCGGCGGGC TGCCGCCGTC CGGCCTGCCC GGCTCGCGCG ACTTCACCGT CGAGATGGAG
ACCGGCACCG GCAAGACCTA CGTTTACCTG CGCACGATCT TCGAGTTGAA CCGCCGCTAC
GGCTTCACGA AGTTCGTGAT CGTCGTGCCG TCGATCGCGA TCAAGGAAGG CGTGCACAAG
ACGCTGTCGA TCACCGAGGA CCATTTCCGC GCGCTGTATG CGGGCGTGCC GTACGACTAC
TTCCTGTATG ACTCCGCGAA GCTCGGCCAG GTGCGCCACT TCGCGGCGAG CGCGGCGATC
CAGATCATGG TGATGACGGT TGCCGCGATC AACAAGAAGG AGATCAACAA CCTCTACAAG
GACAGCGAGA AGACCGGCGG CGAGAAGCCG ATCGACCTGA TCCGCGCGAC GCGGCCGATC
GTGATCGTCG ACGAGCCGCA GAGCGTCGAC GGCGGGCTCG AGGGGCGCGG GCGCGAAGCG
CTCGCCGCGA TGGCGCCGCT TTGCACGCTG CGCTATTCGG CGACGCACGT CGACCGTCAT
CACATGGTGT ACCGGCTCGA CGCGGTCGAT GCGTACGAGC GCAAGCTCGT CAAGCAGATC
GAGATCGCGT CGGCGATCGT CGAGGATGCG CACAACAAGC CGTACGTGCG GCTCGTCGGC
GTGTCGAACC GGCGCGGCGC GATCAGCGCG CGCATCGAGC TGGACGTCGC GACCGCGGCC
GGCGTGAAGC GCCAGATCGT GTCGGCGACC GACGGCGACG ATCTCGAACG CCTGACGAAG
CGCGCGCTGT ATGCAGGGCT GCGGGTCGGC GAAGTCCATG CGGTGAAGGG TGCCGAGTAC
GTCGAGCTGC GCCATCCGGA AGGCGAGGCG TTCCTGTCGC TCGGCGAGGC GTTCGGCGAC
ATCGACACGC TCGCCGTGCA GCGCGAGATG ATCCGCCGCA CGATCCGCGA GCATCTCGAC
AAGGAATTGC GGCTGGCCGA GCGCGGCGTG AAGGTGCTGT CGCTGTTCTT CGTCGATTCG
GTTGAGCGCT ATCGCCGCTA CGACGAGAAC GGGATGCCCG TGAAGGGCGA CTACGCGCTG
ATCTTCGAAG AGGAATATGC GCGCGCGGCC CGCGTGCCGG CTTACCGTGC GCTGTTCGAC
GGCGTCGACG TCGCGCTCGA GGTCGAGCGC GCGCACAACG GCTACTTCTC GATCGACCGC
AAGGGCGGCT GGACCGACAC GAGCGAGAGC AGCGCCGCCG CACGCGAGAA CGCGGAGCGC
GCGTACGGCC TCATCATGCG CGAGAAGGAA GCGCTACTGT CGTTCGACAC GCCGCTGAAG
TTCATCTTCT CGCACTCGGC GCTGAAGGAA GGCTGGGACA ACCCGAACGT GTTCCAGATC
TGCACGCTGC GCGATATCCA GACCGAGCGC GAGCGCCGCC AGACGCTCGG CCGCGGGCTG
CGCCTTGCCG TCGACCAGGA CGGCGAGCGC GTGCGCGACC CGGGCGTGAA CACGCTGACC
GTGATCGCGA CCGAGCGCTA CGAGTCGTTT GCCGAGAATC TGCAGAAGGA AATCGAGGCC
GATACGGGCA TTCGCTTCGG GATCGTCGAG GAACACCAGT TCGCGGCGCT GCCGGTGCAG
GAAGGCGACG GGCCCGCGCA TGCGCTCGGC ATCGAGCTGT CGCGCGTGCT GTGGACGCAT
CTGCACGAGC AGGGCTACGT CGACGCGCAG GGCAAGGTGC TCGATCGGCT CAAGGACGCG
CTGCGCCAGA GCGCGCTCGT GCTGCCCGAG GCGTTCGAGA CGCTGCGCGC GCCGATCGTC
GCGACGCTGC GCAAGCTGTC GGGCCGCTTC GCCGTGCGCA ATGCGGACGA GCGGCGCGCG
ATCGCGTTGC GCCGCGACGC GTCGGGCAAG GCCGTCGTGT TCGGCGACGA CTTCCGCGCA
CTGTGGGACC GTATCCGCCA CCGCACCGTG TACAGCGTCG AGTTCGACAA CGCGAAGCTC
GTGCGCGACT GCACGGCCGC GCTGCGCGAC GCGCCGGACA TCGCGCGCGC CCGGCTGCAG
TGGCGCAAGG CCGAGATCGA CATCGGCAAG GCCGGCATCG AGGCGGTCGA GGTGGCCGGC
GCGGGCACGG TGCTGATCGA CGAAGGCGAG CTGCCGCTGC CCGATCTGCT CACCGAGCTG
CAGGACCGCA CGCAGCTCAC GCGCCGCTCG CTCGCGACGA TCCTGGCCGA CAGCGGCCGG
CTCGACGATT TCCGCGTGAA TCCGCAGCAG TTCATCGCGC TGGCCGCCGA CGCGATCAAC
CGCTGCAAGC GGCTCGCGCT GGTCGCGGGC ATCGCGTACC GCAGGCTCGG CGAGCGCAAC
GTGCATGCGC TCGAATCGTT CGAGAGCGAG GCGCTGACCG GGTATCTGCG CAACCTGCGT
CCCGATGCGC GCAAGTCGAT CCACGAGGCC GTCGTGTGCG AGACCGACGC GGAACGTGCG
TTCGCCGATG CGCTGGAAGC ACACGACGGC GTGAAGCTGT ACGCGAAGCT GCCCGCGTGG
TTCCGCGTGC CGACGCCGCT CGGCAGCTAT CACCCGGACT GGGCCGTGCT CGCGGAGCAG
GATGACGGCG AGCGGCTGTA TTTCGTCGTC GATACGCCGA ATGCCGATGG CGACGTGACG
AGCGAGCACG AGCGCGCGAA GCTCGCGTGC GGTGAAGCGC ATTTCCGTGC GTTGGTGGAT
GGGGAAGATG CCGCGCGATT CGTGCGCGTC AGGCAGGCGG ATGCGTTGTT CGAGCCTGCT
GCAACCGTCG CCCCGCTGGC GAGCGCGGGA CGCTGA
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| Protein sequence | MRLHFEADLD YQREAIDAVC DLFRGQESYR GDFSVLANAA PGTTAAAQGS LGFAVSEQGV
GNRLSLTDDA LARNLADVQL RGGLPPSGLP GSRDFTVEME TGTGKTYVYL RTIFELNRRY
GFTKFVIVVP SIAIKEGVHK TLSITEDHFR ALYAGVPYDY FLYDSAKLGQ VRHFAASAAI
QIMVMTVAAI NKKEINNLYK DSEKTGGEKP IDLIRATRPI VIVDEPQSVD GGLEGRGREA
LAAMAPLCTL RYSATHVDRH HMVYRLDAVD AYERKLVKQI EIASAIVEDA HNKPYVRLVG
VSNRRGAISA RIELDVATAA GVKRQIVSAT DGDDLERLTK RALYAGLRVG EVHAVKGAEY
VELRHPEGEA FLSLGEAFGD IDTLAVQREM IRRTIREHLD KELRLAERGV KVLSLFFVDS
VERYRRYDEN GMPVKGDYAL IFEEEYARAA RVPAYRALFD GVDVALEVER AHNGYFSIDR
KGGWTDTSES SAAARENAER AYGLIMREKE ALLSFDTPLK FIFSHSALKE GWDNPNVFQI
CTLRDIQTER ERRQTLGRGL RLAVDQDGER VRDPGVNTLT VIATERYESF AENLQKEIEA
DTGIRFGIVE EHQFAALPVQ EGDGPAHALG IELSRVLWTH LHEQGYVDAQ GKVLDRLKDA
LRQSALVLPE AFETLRAPIV ATLRKLSGRF AVRNADERRA IALRRDASGK AVVFGDDFRA
LWDRIRHRTV YSVEFDNAKL VRDCTAALRD APDIARARLQ WRKAEIDIGK AGIEAVEVAG
AGTVLIDEGE LPLPDLLTEL QDRTQLTRRS LATILADSGR LDDFRVNPQQ FIALAADAIN
RCKRLALVAG IAYRRLGERN VHALESFESE ALTGYLRNLR PDARKSIHEA VVCETDAERA
FADALEAHDG VKLYAKLPAW FRVPTPLGSY HPDWAVLAEQ DDGERLYFVV DTPNADGDVT
SEHERAKLAC GEAHFRALVD GEDAARFVRV RQADALFEPA ATVAPLASAG R
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