Gene Bamb_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0013 
Symbol 
ID4309449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp23197 
End bp23673 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID638147791 
Productalkylhydroperoxidase 
Protein accessionYP_771908 
Protein GI115350069 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGA AACTCAATCC GTTTGCCGCC GCCCCTGCGC TGATGAAGAG CTGGATGACC 
GTGTCGGTCG CTGCCGCCGG GAGCCTCGAG CCGACGCTGA TCGAGCTGGT CAAGATCCGC 
GCATCGCAGA TCAACGCGTG TGCGAACTGC CTTAACATGC ACACCGTCGA GGCGCGCGAG 
CAAGGCGAGA CCGAGCAGCG CATCAACCTG CTGGCCGCCT GGCGCGAAGC GCCCTGTTAC 
ACCGACCGCG AACGCGCGGC GCTCGGCTGG ACCGACGCGC TCACGCGTCT GTCGGAGGGC 
CACGGCGCGC ACGAGGCCGC GTATGCGGCG CTGAACGACC ACTTCAGCCA GGAGGAACAG 
GTGAAACTTA CGCTGATGAT CAACGTGATC AACGGCTGGA ACCGGCTTGC CGTCGGCTTC 
GGGCTGTGGA TCGATCCGGC CGAGGCGAAG GCCGCGGCCG CGAAGATGGT GGCTTGA
 
Protein sequence
MTAKLNPFAA APALMKSWMT VSVAAAGSLE PTLIELVKIR ASQINACANC LNMHTVEARE 
QGETEQRINL LAAWREAPCY TDRERAALGW TDALTRLSEG HGAHEAAYAA LNDHFSQEEQ 
VKLTLMINVI NGWNRLAVGF GLWIDPAEAK AAAAKMVA