| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0004 |
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| Symbol | |
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| ID | 4309440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 6098 |
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| End bp | 8842 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638147778 |
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| Product | GTPase subunit of restriction endonuclease-like protein |
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| Protein accession | YP_771899 |
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| Protein GI | 115350060 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0928262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGT ACTGCGGGGA CGACGACCCT AAATCCATCT TAGATGCGGC CATACACTGG
CGCGACACGG CGCTCCTAGG CGGTCGCTCC GTCCTGACCA ATCAACCGCT TTGGACATCA
CAAGCTCTCG ACTTGCTCGA CGAGCACTTC GTACGTAACC CCGATCTCGG AGACGGAAAG
TTTCTTGAGA AATTGGAGAG TCAGCTCGCA CCGGCCGCGA ACTCCGCGAA GCAGCTGGTC
GCCGAAATGA TGTGGTTGCT GTACCTCTGC CCGAGTAGCC TGACAGCAGC CCACAAACGC
AAGACTATCC AGGCTATTTG GTCGTGGTCC GGCGAACCGT TACCGGCGGA CTCGCGCTGG
CTAGATGACG ACGTGCTCGC AGGCGTCGGT AGCGCTGGTC CCGGCTTCAA TCAAAATCAA
TGGCGCGAGC TCGCCTTCCT AATCAACTTC CTCCGTCGCT TCAATGAACT AACCAACATT
CGTCAACTGG AGTTGATCGG GGAGCGATGG GCATTCGATG AATGGCTTCG CCAGGTCCCA
GATTGGGAAG CAAGACAGTT TCGTCACATG CTGCTCTTCC TGCTATTCCC CGACGACTTC
GAACGGATCT TTGGGCAGAA CGATCGCAAG ACTATTGTTC GCCACTACTC AAAGCACGAG
CGCCGTGTAG TTAATCGCAT GGATCCTGTT CAACTGGATC GCGAACTGCA AGCTATTCGG
AAACGCCTTG AAACGGAGCG CGGCACGACC CAGCTTGACT ATTACGTGCC CCCGTTGAAA
GGAGAGTGGC GCAGCGAGAC ATTCGCCGCA GCAACAGAGA ACGTAACGGC GGAGCACATT
CGGTTGGCTC TGCACGAAAT CGACCAAGAA GGTGTGCCAA CGGACGCGGA ATCCACTGGC
TACGATCTTG TTTATGACGG CAAGCGCTAT CCGCCTAAGT TGGTCCTGTC TCTGGCTGTT
AAACAAGCAA CGGGCGAGCC ACTAGATCGT GCAGCTTTCT CCGGCGGCGA AGCTTCGTCC
GCCTTCCGGT TGCTGCGACG TCTCGATTTC GAAGTTGAAC CTAAGGAGGA ATCGTCAAAC
GGCATTCCGG GGCTCCTTAA TCGTTTTCTC AAACAGGCGA GTGATGGGAA GGAACTCGGG
ACAAAGGGCT ACCTCAGCGT ATACCGGGAT CTCAAAGTTC GAGTGAGTTT CGGCAAAGGC
AACTTTGCCC GGATTCCCTG GATCGCGTTT CTTGGCGATG GACAATCAGT CAATCAAGGC
ATTTACCCCG TCCTGCTTCT GTATGCTGAG CAGCAGCAAC TATTGCTGTG CTATGGAGTA
AGCGAAGAGG GGGCGTCCCG ATTGAGCTGG GGCGAACTGG CCGGAGCTCA AACGGTAAGG
GAATGGTTTA AGGGACGATA TGGTCGAGTG CCGGATCGCT ACGACGCATC CATCGTTCGC
TCGACGTACG ACCTCACGCA ACCATTGCCA ATGGCCGAGC TGCAACAGGA TTTGGACGAT
GTAATCGACA TCTATAACCA AGTGCTCGCC AGCGACGATG CGGGGGAACT ACCGGATGCA
ATTGATCTAG AGCAGTCGGA CGAACCACTT CCTGTCAGAG CGGATCTTCG CGCAGCAATC
GATGCATTCA GCAACGCTCT AGTTGCTAGT GGCGTAAAGT TCGGTGATCA CCACCATGGA
CTTGTTGCGT CCTTCATTTC AAGTCTGGTC ACGAAACCGT TAGTCATTCT GACTGGACTG
TCCGGTTCGG GTAAGACACA AATTGCCATT CGATTCGGTG AGTGGCTAGG CGAGGACCGG
CTTCACGTCG CCGCAGTCCG GCCCGACTGG ACAGGCGCAG AAGCGTTGTT CGGATACGAA
GACGCCCTTA AGCGTGAGCT CGATGGGCGC CGGGCCTGGT CCGTTCCCGC ACCGTTGGAG
TTCATCTTGA AGGCGGCAGC AGATCCACAG CATCCGTACC TGCTACTTTT GGATGAGATG
AACCTCGCAC ACGTCGAGCG CTACTTCGCC GATGTACTGT CAGGTATGGA GTCCGGCCAA
CCGTGTATTC CAAACCTTCA CAAGGGAGCG GATGACTGCT GGCGACTGAA GGCCAACGCA
GAAAAGCAGC TGCCGCTACC GGGAAATCTC TGGATCGTCG GCACCGTCAA CATCGACGAA
ACGACCTACA TGTTCTCGCC AAAAGTACTC GATCGCGCCA ACACTTTCGA GTTCCGCGTT
CACTCAAGTG ATCTCTCGAT CGACGCGATC AAGCCGCACC CGTGCGTTGC CGGCGATCAG
GAGCTGGTGA GGGGATTGCT GAGCATCGCG CAGGATGACA ACTGGCATCG AGATCGCCAG
AGCGACACGC TCAACGAGCT GAACCAACGC CTGCGGCAAT TGCACGAACT CCTCAGTCGG
TACAACCTCG AGTTCGGCCA TCGTGTCTTC TACGAGGCAA TACGATTTGC GGCCTTGGCA
CAAGAGGCTG GGATCAACGG CTTGGCATCG ATCGTGGACC GGATTGTCAT GCAAAAGGTA
CTGCCGAGAT TGCATGGATC GCGCAGACGC CTCGAATTGC CTCTCCTGGC GCTGGCGCAG
TTCTGTCGGG ACCTGCCGGA TTCAATTCTG ACCGATGACA AGCTTCCGAC ATTTGTGATC
GATGAAATGC CAGGGCAAGG TGCAACACTT CCCATCGCCT ATGCTAAGAC CGTCCGCATG
CTTCGAAGCC TGCGTGCCAA TCAATTTGCT AGCTTTACGG AATAA
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| Protein sequence | MSRYCGDDDP KSILDAAIHW RDTALLGGRS VLTNQPLWTS QALDLLDEHF VRNPDLGDGK
FLEKLESQLA PAANSAKQLV AEMMWLLYLC PSSLTAAHKR KTIQAIWSWS GEPLPADSRW
LDDDVLAGVG SAGPGFNQNQ WRELAFLINF LRRFNELTNI RQLELIGERW AFDEWLRQVP
DWEARQFRHM LLFLLFPDDF ERIFGQNDRK TIVRHYSKHE RRVVNRMDPV QLDRELQAIR
KRLETERGTT QLDYYVPPLK GEWRSETFAA ATENVTAEHI RLALHEIDQE GVPTDAESTG
YDLVYDGKRY PPKLVLSLAV KQATGEPLDR AAFSGGEASS AFRLLRRLDF EVEPKEESSN
GIPGLLNRFL KQASDGKELG TKGYLSVYRD LKVRVSFGKG NFARIPWIAF LGDGQSVNQG
IYPVLLLYAE QQQLLLCYGV SEEGASRLSW GELAGAQTVR EWFKGRYGRV PDRYDASIVR
STYDLTQPLP MAELQQDLDD VIDIYNQVLA SDDAGELPDA IDLEQSDEPL PVRADLRAAI
DAFSNALVAS GVKFGDHHHG LVASFISSLV TKPLVILTGL SGSGKTQIAI RFGEWLGEDR
LHVAAVRPDW TGAEALFGYE DALKRELDGR RAWSVPAPLE FILKAAADPQ HPYLLLLDEM
NLAHVERYFA DVLSGMESGQ PCIPNLHKGA DDCWRLKANA EKQLPLPGNL WIVGTVNIDE
TTYMFSPKVL DRANTFEFRV HSSDLSIDAI KPHPCVAGDQ ELVRGLLSIA QDDNWHRDRQ
SDTLNELNQR LRQLHELLSR YNLEFGHRVF YEAIRFAALA QEAGINGLAS IVDRIVMQKV
LPRLHGSRRR LELPLLALAQ FCRDLPDSIL TDDKLPTFVI DEMPGQGATL PIAYAKTVRM
LRSLRANQFA SFTE
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