Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0001 |
Symbol | dnaA |
ID | 4311769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 203 |
End bp | 1780 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638147775 |
Product | chromosomal replication initiation protein |
Protein accession | YP_771896 |
Protein GI | 115350057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.375862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATT TCTGGCAACA CTGTTCCGCA CTGCTGGAGC GCGAGCTGAC GCCCCAGCAG TACGTGACGT GGATCAAACC CTTGGCCCCG GTGGCCTTCG ATGCGTCGGC GAACACGCTG TCCATCGCCG CGCCGAACCG CTTCAAGCTG GACTGGGTCA AGAGCCAGTT TTCGGGCCGG ATCTCCGATC TGGCCCGCGA TTTCTGGAAT GCGCCGATCG AAGTCCAGTT CGTCCTCGAT CCGAAAGCCG GCATGCGCAG CGCCGCCGCG CACGCCGCGC CGGCCGCCCA GCGCGCGCCG CTGACACCGA ATGGCCCCGC CGCGACGGTC GCCGCGATCG CCGCCAATCT GGCCGCGAAT GCCGGTGCCG CGCCCAGCGC GCCGGCCGAC GTGCCGATGA CGGCGTCGGC GGCCGCCGCG CACCACCTGA ACGCCGATGA CGCCGACATC GACCTGCCGA GCCTGCCCGC GCACGAAGCG GCCGCCGGGC GCCGCACGTG GCGTCCGGGC CCCGGCGCCG CGCCCGCGAA CGGCGGTGAA GCCGATTCGA TGTACGAACG TTCGAAGCTG AACCCGGTGC TCACGTTCGA CAACTTCGTG ACCGGTAAGG CGAACCAGCT CGCACGCGCC GCCGCGATCC AGGTCGCCGA TAACCCCGGC ATCTCGTACA ACCCGCTGTT CCTGTACGGC GGCGTCGGCC TCGGCAAGAC CCACCTGATC CACGCGATCG GCAATCAGCT GCTGCTCGAC AAGGCCGGTG CGCGGATCCG CTACATCCAC GCCGAGCAAT ACGTGTCCGA CGTGGTGAAG GCATACCAGC GCAAGGCGTT CGACGACTTC AAGCGCTACT ACCACTCGCT CGACCTGCTG CTGATCGACG ATATTCAGTT CTTCTCCGGC AAGTCGCGCA CGCAAGAGGA ATTCTTCTAC GCGTTCGAGG CGCTCGTCGC GAACAAGGCG CAGGTGATCA TCACCAGCGA CACGTATCCG AAGGAGATCT CGGGCATCGA CGATCGCCTG ATCTCGCGCT TCGACTCGGG CCTCACCGTC GCGATCGAGC CGCCCGAGCT CGAAATGCGC GTCGCGATCC TGATGCGCAA GGCGCAGTCG GAAGGCGTGA ACCTGTCGGA AGACGTCGCG TTCTTCGTCG CGAAGCACCT GCGCTCGAAC GTGCGCGAAC TCGAAGGCGC GCTGCGCAAG ATCCTCGCGT ATTCGAAGTT CCACGGCCGC GAGATCTCGA TCGAGCTGAC CAAGGAAGCG CTGAAGGACC TGCTGACCGT GCAGAACCGG CAGATTTCGG TCGAGAACAT CCAGAAGACC GTCGCCGACT TCTACAACAT CAAGGTCGCC GACATGTATT CGAAGAAGCG TCCCGCGAAC ATCGCGCGGC CGCGGCAGAT CGCGATGTAC CTGGCGAAGG AACTCACGCA GAAGAGCCTG CCCGAGATCG GCGAGCTGTT CGGCGGGCGC GACCACACCA CCGTGCTGCA CGCCGTGCGC AAGATCGCCG ACGAGCGCAG CAAGGATGCG CAGCTCAACC ACGAGCTGCA CGTGCTGGAA CAGACGCTGA AGGGCTGA
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Protein sequence | MNDFWQHCSA LLERELTPQQ YVTWIKPLAP VAFDASANTL SIAAPNRFKL DWVKSQFSGR ISDLARDFWN APIEVQFVLD PKAGMRSAAA HAAPAAQRAP LTPNGPAATV AAIAANLAAN AGAAPSAPAD VPMTASAAAA HHLNADDADI DLPSLPAHEA AAGRRTWRPG PGAAPANGGE ADSMYERSKL NPVLTFDNFV TGKANQLARA AAIQVADNPG ISYNPLFLYG GVGLGKTHLI HAIGNQLLLD KAGARIRYIH AEQYVSDVVK AYQRKAFDDF KRYYHSLDLL LIDDIQFFSG KSRTQEEFFY AFEALVANKA QVIITSDTYP KEISGIDDRL ISRFDSGLTV AIEPPELEMR VAILMRKAQS EGVNLSEDVA FFVAKHLRSN VRELEGALRK ILAYSKFHGR EISIELTKEA LKDLLTVQNR QISVENIQKT VADFYNIKVA DMYSKKRPAN IARPRQIAMY LAKELTQKSL PEIGELFGGR DHTTVLHAVR KIADERSKDA QLNHELHVLE QTLKG
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