| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6634 |
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| Symbol | |
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| ID | 4308468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008385 |
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| Strand | - |
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| Start bp | 42119 |
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| End bp | 42583 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638147773 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_771711 |
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| Protein GI | 115345526 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000000197528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCAA CCTTCCCGGC ATTCCGCCTC AACCGCAACG CCCTGTTCTA CATGGGCCTC
TTCGCCCTCC TGGCGTTCTT CCTGCTGGCC CCCCAGCACG CATTCGCCTC CGAGGGCACC
GGCGGCTCTC TGCCGTATGA GAGCTGGCTG ACCAACCTCC GCAACTCCGT CACCGGCCCG
GTGGCCTTCG CGCTGTCGAT CATCGGCATC GTGGTCGCCG GCGGCATCCT GATCTTCGGC
GGCGAACTCA ACGGCTTCTT CCGCACGTTG ATCTTCATCG TCCTGGTCAT GGCCCTGCTG
GTCGGCGCGC AGAACATGAT GAGCACGTTC TTCGGCCGTG GCGCGGAAAT CGCCGCCCTG
ACCGATGGCG CGCTGCACCA GGTCAAGGTC GCCGCGCTGG ACGTGGCCGG CTTCCCCGGC
GAAGCCGTCA TGCGCTGGGC CGAGCGCGGC CACATCGCGG GGTAA
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| Protein sequence | MQATFPAFRL NRNALFYMGL FALLAFFLLA PQHAFASEGT GGSLPYESWL TNLRNSVTGP
VAFALSIIGI VVAGGILIFG GELNGFFRTL IFIVLVMALL VGAQNMMSTF FGRGAEIAAL
TDGALHQVKV AALDVAGFPG EAVMRWAERG HIAG
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