| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_3012 |
|---|
| Symbol | |
|---|
| ID | 4285579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 3292067 |
|---|
| End bp | 3293329 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638142508 |
|---|
| Product | ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| Protein accession | YP_758231 |
|---|
| Protein GI | 114571551 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCG CCCTTGCAGC GTGCGGCACG ACCCAGACCA CACCGCCGCC GCCTGTCATC
ATTCCGCAGG AACCCATCGT CGAGCAACCG GTCGAGATCG AGCCGGAACC GGTCGAGGAA
CCGGTCGCGA CCGGACTCAT CCCGCCACAC ATGGCCAACC GTGACCTCGC CCGTGTTGCT
GTCCTGCTGC CGTTCTCGGC CGACAGCTCC GGTGCCCGAT CCGAAGCGAT ACGACTATTG
CATTCGGCCG AACTCGCGCT GTTTGAACGC GGCAGCGGCA ATTTGCTGAT GATTCCGAAA
GATACCCAGG GTACCGCCGA GGGCGCCCGT GAGGCAGCCC GCGCCGCCGT CGAGGATGGT
GCCGACATCA TCATCGGCCC ATTGTTCGGC CCGGCAGTGT CAGCAGCAGG CCAGGTTGCT
CGGCAGGCCG GCATACCGAT CATCGCCTTC ACGACAGATA CCACCGTCGC CGGCGACGGC
GTCTATCTGA TGAGTTTCCC GCCCGAGATC GAGGTCGCCC GGATTACAGA GTATGCGACC
CGTCGCGGTG TCGAGCGTTT CGCCTATCTC GGCCCGCAGA ACCGTTATGG CATGGCGGTG
CACGCGGCGC TGCAGGACAA TGCCGCACTG ACCGGCGGAT ACATTGCGGC CGAGAGTTTC
TATACCGGTG ATGTCGAGGC CATGGCCCGC GCCTCGGCCC GTTTGGCGGA AGGTGTTTTT
GAGCCGCTGA CACCGGAAGA AGCCGACGAG TTGCGGCTGC TGGAGTGGGA GCCCGATCCG
GAAGCGCCGT TCCAGGCTGT GATGCTGCCG GAAGGTGGCA CCCGCCTGCG GGCGCTGGGG
CCGCTCCTGA TTTCCCAGGC TGTCGACCCT CTTGTGGTCC GCTTTCTGGG CACCGGCCTG
TGGAATGATC CCGACCTTTT GCGTGAGCCC GCCCTGCGGG GCGGCTGGTT TGCCGGACCC
GACCTGAGCG CCCGCACGGC CTTTGAGACG GCTTATGAAT CCAGCTATGG CAGCGAACCA
TCGCGGATCG CCAGCCTCGC CTATGACGCC ATGAGCCTGG CAGCTCATCT GGATGGTGGC
GAGCGTGGCT TCAGCCGTGA GGCAATTGAA GAAGACCAGG GCTTCCTGGG TGCCGACGGC
CTGTTCCGCT TCCGGGCAAC CGGCATGATC GAACGCGGCC TGGCCATCTA TGAGATGCGG
TCACGCGGAT TCCGCGAGAT CGAACCGGCT CCGCTGTCAT TCGAACCGGA AGCCGCATTC
TAG
|
|---|
| Protein sequence | MVGALAACGT TQTTPPPPVI IPQEPIVEQP VEIEPEPVEE PVATGLIPPH MANRDLARVA
VLLPFSADSS GARSEAIRLL HSAELALFER GSGNLLMIPK DTQGTAEGAR EAARAAVEDG
ADIIIGPLFG PAVSAAGQVA RQAGIPIIAF TTDTTVAGDG VYLMSFPPEI EVARITEYAT
RRGVERFAYL GPQNRYGMAV HAALQDNAAL TGGYIAAESF YTGDVEAMAR ASARLAEGVF
EPLTPEEADE LRLLEWEPDP EAPFQAVMLP EGGTRLRALG PLLISQAVDP LVVRFLGTGL
WNDPDLLREP ALRGGWFAGP DLSARTAFET AYESSYGSEP SRIASLAYDA MSLAAHLDGG
ERGFSREAIE EDQGFLGADG LFRFRATGMI ERGLAIYEMR SRGFREIEPA PLSFEPEAAF
|
|---|
| |