| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_3002 |
|---|
| Symbol | |
|---|
| ID | 4283984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 3282813 |
|---|
| End bp | 3283451 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638142498 |
|---|
| Product | DNA-N1-methyladenine dioxygenase |
|---|
| Protein accession | YP_758221 |
|---|
| Protein GI | 114571541 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCTTTGTCAT GCCCGACGGT TTCCGTCTCC TGCCTGGAAA ACTCTCCCGT
CCGGTGCAGC AGACGCTGAT CGATGCAGTG GTAGCGGTGC AGGAGAAAAC GCCCTTCTGG
CGCCCGTCCA TGCCGCGCAC CGGCCAACCC CTGTCAGTGA GGATGACCAA TTTCGGGTCA
TTGGGATGGG TTACCGACAA GACCGGTGGC TACCGCTATG AGCCGCAGCA TCCCGAGACC
GGACAGGTGT GGGCTCCCAT GCCGAACCTG TTGACGGATC TTTGGCGTGA ATTGGCGGCC
TATCCGGCCG ATGCCGAGGC TTGCCTGGTC AACTGGTATG CGCCTGACAG CAGGATGGGC
CTGCATGTCG ACTGGGATGA AGAGGCGACC GACGCGGCCG TCGTCTCGAT CTCGCTGGGT
GACAAGGCGC GCTTTCGCAT TGGTGGTCCC CAGCGTGGCG GCAAGACCGG CTCGATGGTG
CTGTCATCCG GCGATGTGGT GGTCCTCGGC GGCGAGGCGC GACGCTGCTA TCACGGCGTC
GACCGGATTT ATCCGGGCAC CTCGACCCTG CTGCCGCCGG ACGCCTTCCC CGGCGGTGGC
CGGATCAATC TGACGATGCG TCGGGTGAAA CGTCCCTGA
|
|---|
| Protein sequence | MSTPFVMPDG FRLLPGKLSR PVQQTLIDAV VAVQEKTPFW RPSMPRTGQP LSVRMTNFGS
LGWVTDKTGG YRYEPQHPET GQVWAPMPNL LTDLWRELAA YPADAEACLV NWYAPDSRMG
LHVDWDEEAT DAAVVSISLG DKARFRIGGP QRGGKTGSMV LSSGDVVVLG GEARRCYHGV
DRIYPGTSTL LPPDAFPGGG RINLTMRRVK RP
|
|---|
| |