Gene Mmar10_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2979 
Symbol 
ID4285182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3260638 
End bp3261156 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID638142475 
Productprotein translocase subunit secB 
Protein accessionYP_758198 
Protein GI114571518 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CACCCAACAC GCCCGCCGAC AATGCTGCAG CCCAGGCGCC GCAGCTGCGC 
GTACTTGCGC AATATGTGAA GGACCTCTCC TTCGAAAACC CGGGCGCCCC GGAAACACTC
CGCCCCGGCC AGCAGGCCCC GGCAATTGAC CTGGCCATCG ACGTTCAGGC ACGCACGGCC
GGCGAAGACA CGTTTGAAGT CGTCCTGACG GTCAATGCCA AGGCATCCCG TGACGAATCC
GTGGTCTTCA TCGCCGAGCT TTCCTACGCC GGCCTGTTCC AGCTTGCCAA TGTGGGTGAA
ACCGATCGCG AACCCTTCCT GCTGATCGAA TGTCCGCGCT TGATCTTCCC GTTCGCCCGC
CGCGTTCTTG CCGACGCCAC ACGCGATGGC AATTTCCCGC CGCTGATGCT GGATCCGGTC
GATTTTGCCG GCCTGTACCG CGCCCAACTC GCCAAGCGCG CCGCTGCCGC TCCGGGTTCG
GAAAGCAATG GCAATGGCGA TCCGGCTGCA GCCAACTAG
 
Protein sequence
MTDAPNTPAD NAAAQAPQLR VLAQYVKDLS FENPGAPETL RPGQQAPAID LAIDVQARTA 
GEDTFEVVLT VNAKASRDES VVFIAELSYA GLFQLANVGE TDREPFLLIE CPRLIFPFAR
RVLADATRDG NFPPLMLDPV DFAGLYRAQL AKRAAAAPGS ESNGNGDPAA AN