| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2964 |
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| Symbol | trmE |
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| ID | 4286860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 3247096 |
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| End bp | 3248412 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638142460 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_758183 |
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| Protein GI | 114571503 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATACAA CGGTTTATGC GCTTGCGACC CCGGCCGGTC GGTCCGGTGT GGCGGTCATC
CGGCTTTCCG GTGGCGGCGC TGGCGGCATG CTCGATGCGT TGGCCGGTCT GCCCCGCCCT
CAACCGCGTA TGGCGACCCT GCGGGCCCTT CGCGATAGTG GAGGCTCGGT CATGGACCGG
GGCCTGGTGC TCTGGTTTCC CGGTCCGGGG AGTTTCACGG GCGAGGACAG TGCGGAATTC
CATGTCCATG GTGGGCCGGC TGTTATCGAC GCGGTCCTGT CGGCGCTCGA CGAGGCAGGA
GCCCACCCGG CGGAGGCCGG AGAGTTCACG CGACGCGCTT TCGAGAATGA AAAAATCGAC
CTGACCGAAG CTGAGGGTCT GGCGGATCTG ATTGACGCCG AAACGGAAGG TCAAAGGGTT
CAGGCGCTAT CGCAAATGTC CGGTTCGTTG CGTCGTCTCT ATGATGGTTG GCGCGACGCC
CTGATAACGG CGATGGCCTC GATTGAGGGC GAAATCGATT TTCCCGATGA GGCCGACGTC
CCGGACGCTC TGTCCCACGC CGCTTATGAA CCGTTGAGTG AACTCATTGG GTCGATGTTT
GAACATCTTG ATGACGGGCG GCGGGGAGAG CGGATCCGGA TCGGTTTCTC GATCGTTTTG
ATCGGTGCCC CGAACGCCGG CAAGTCGAGC CTGCTCAATT GCCTGGCCCG TCGCGATGCA
GCGATTGTCA CCGATATTCC TGGAACCACT CGCGACATTG TCGAGGTTCA ATTGACGCTG
GGGGGGTTCC CGGTCGTGAT CTCCGATACG GCGGGATTGC GTGAGGCCGT TGATGCGATC
GAGGCGGAGG GTGTCCGGCG CGCCCTGGAT CGTGCCGAGC ATGCTGATCT CCGGATTGGT
GTCGCGGATG CGCGATCGGA TGAAGAGCTG GTTGATTTGG AGGGTCGTCT CACCGACGGG
GATTTGTTGG TCCTCAACAA GCTCGATCTT GGTTTGGTTT CGGAACGGGA CGGGGCCTAT
CGGCTCAGCG CCAAGTCGGG CGACGGCGTC GAAGCTCTTG AGGCCCGGAT CGAGCAAATC
GTCCGTGATC GGCTGTCGGT GCGGGAAATG CCCGCCTTGA GCCGGGTCCG TCATCGGCGC
GCGGTTGAGA CTGCCCTGGA GGCCCTGTCG CGGTGTCGGG ACCAGTTGGC TGACGCGCCC
GAGCTGGCGG GTGAGGATGC GCGTCTCGCT GTGCGAGCGC TGGAGAGCCT GACGGGTCGG
GTTGATGTCG AGGATATTCT TGACCGGGTC TTCTCCCAAT TCTGCATCGG GAAGTAG
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| Protein sequence | MNTTVYALAT PAGRSGVAVI RLSGGGAGGM LDALAGLPRP QPRMATLRAL RDSGGSVMDR
GLVLWFPGPG SFTGEDSAEF HVHGGPAVID AVLSALDEAG AHPAEAGEFT RRAFENEKID
LTEAEGLADL IDAETEGQRV QALSQMSGSL RRLYDGWRDA LITAMASIEG EIDFPDEADV
PDALSHAAYE PLSELIGSMF EHLDDGRRGE RIRIGFSIVL IGAPNAGKSS LLNCLARRDA
AIVTDIPGTT RDIVEVQLTL GGFPVVISDT AGLREAVDAI EAEGVRRALD RAEHADLRIG
VADARSDEEL VDLEGRLTDG DLLVLNKLDL GLVSERDGAY RLSAKSGDGV EALEARIEQI
VRDRLSVREM PALSRVRHRR AVETALEALS RCRDQLADAP ELAGEDARLA VRALESLTGR
VDVEDILDRV FSQFCIGK
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