Gene Mmar10_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2952 
Symbol 
ID4286259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3234680 
End bp3235357 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID638142448 
Producthypothetical protein 
Protein accessionYP_758171 
Protein GI114571491 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG CTCCCGACAT CGCGACCCGA CGCGACATGC TCCTGACCGA TATTGGCAAA 
CTGGCGGCCG AGGCGGGCCG ACCGTCTGAC AGCATCAAAC TGGTCGCAGT CTCCAAACGC
CAGTCTGAAG AGCGGCTAGA TGCAGCCCTG GCAGCTGGCC AACGTGTTTT CGGTGAAAAC
CGTGTCCAGG AAGCGATGGC ACACTGGGGT GAGCGGCGAA AGGTCTGGTC GGACCTCGAA
TTGCGCTTGA TCGGCCCCCT GCAGTCCAAC AAGGCCGCCG ATGCCGTGGC GCTGTTCGAC
GTGATCGAAA CCCTCGATCG GCCCAAGTTG GCCGATGCCC TGCGCAGGGA AATGGACCGC
CAGGGCCGCA GGCCGCGTTT ATATGTCCAG GTGAATACGG GCGCGGAGAC CCAGAAGGCG
GGCGTATTGG TGTCCGAGCT GCCCGCATTC CTCACTCGCA TGCGAGATGA ATTCGGCTTT
GAAATCAGTG GACTGATGTG TATCCCGCCG GTCGAACAGC CACCGGGCCT GCACTTTGCT
CTATTGGCGA GGTTGGCGGC AGATAACGGC ATCGGACATC TATCGATGGG GATGAGTGCC
GACTATCCGG TTGCTGTCGC CCTCGGCGCC ACATCTGTTC GGATCGGGAC CGGCCTGTTC
GGAGACCGCG AGGTCTAG
 
Protein sequence
MTDAPDIATR RDMLLTDIGK LAAEAGRPSD SIKLVAVSKR QSEERLDAAL AAGQRVFGEN 
RVQEAMAHWG ERRKVWSDLE LRLIGPLQSN KAADAVALFD VIETLDRPKL ADALRREMDR
QGRRPRLYVQ VNTGAETQKA GVLVSELPAF LTRMRDEFGF EISGLMCIPP VEQPPGLHFA
LLARLAADNG IGHLSMGMSA DYPVAVALGA TSVRIGTGLF GDREV