| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2924 |
|---|
| Symbol | |
|---|
| ID | 4285000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 3204007 |
|---|
| End bp | 3205308 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638142419 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_758143 |
|---|
| Protein GI | 114571463 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG GTCTCGCCCC TCGCCGTGCT GCGGCGCTTG CCTATATGGC CGTGATGAAA
CAACGCCGCA CGCTCGAGGC GGCGCTGGAG CACACCCCTG AATTTGCTGC GATGAGCGAT
CGTGATCGCG CCTTTGCGCG CGCCATCACA GCGACCACTT TTCGGCGGCT CGGCCAGACC
CGCACCGTTC TGAACGGGCT GCTGTCGCGC CCCCTGCACG AGACGTCAGA AGGTGCGCAA
GCCCTGCTCA TCACCGGCGC CACCCAGCTA TTGTGGATGG ATGGCGCGCC GCATGCGGTC
GTGTCGTCAA CCGTCGAGCT GGCCGATGCC CGCAGCGACG CGCGAAAGCT GAAAGGCCTG
ATCAACGCTG TCCTTCGGCG CGTCGATCGT GAGGGCCGGG AACGCCTCAA GCCAACCCTG
CCTCGCGACA ATCTGCCCGA CTGGCTCCGC GATAGCTGGC GCGCCGCCTA CGGCCCCGGC
ACGCTCAGCC GGATGGCCAA TGCAATCACG GTTGCGCCAC CGCTCGATCT GACGGTCAAG
GATCCGGACA CACGCGAGCA CTGGGCCCGG GCGCTCGACG CGACAATCCT GCCGAACGGC
AGTTTGCGTC GGGACACAGT GGGCGATGTC CGGGCCCTGC CCGGCTATCG CGAAGGCGCT
TGGTGGGCCC AGGATGCGGC CGCTGCCATC CCTGCCACCC TGCTGACATT GGGACCCGGT
TCGTCTGTCA TCGATCTGTG TGCGGCGCCC GGCGGCAAAA CCATGCAACT GGCCGCGACC
GGTGCTGATG TCACCGCGCT GGACCTGTCC GAGAAGCGCC TCGAACGGGT GCGTGAAAAT
CTGGGGCGCA CCGGCTTGTC AGCCACGCTC GTCGCCGGTG ACGCCCTGAC CTACAAGCCG
GCTCAGCCGG TCGATGCGGT GCTGCTCGAC GCACCCTGCA CTGCCACCGG CACATTGCGG
CGCCATCCCG AAGCGGCCTG GATCAAGCGG GCTGACGACA CGGGACGGAT GGCCCGGCTG
CAGGATGAGA TGATCAAGGC TGCAGCCGCC ATGCTGAAAC CCGGCGGACA GCTGGTGCTC
TGCACCTGCT CGCTGCAGCC CGAGGAAGGC GAGGCGCTGG CTGGCCGGGT CGCGGGACGG
CACCGGCAAC TCAAGGAGTC GCCCATCCAG CCCGACGAGC TGGCGGGCGT CGAGAGCGCG
CTGACACCGG CCGGCTGGGT TCGTCTGACA CCGGCCCTAT GGGCCGAACA GGGCGGCATG
GACGGTTTCT TCATCGCCCG TTTTACAAAG CGCGCGGGAT AG
|
|---|
| Protein sequence | MSDGLAPRRA AALAYMAVMK QRRTLEAALE HTPEFAAMSD RDRAFARAIT ATTFRRLGQT
RTVLNGLLSR PLHETSEGAQ ALLITGATQL LWMDGAPHAV VSSTVELADA RSDARKLKGL
INAVLRRVDR EGRERLKPTL PRDNLPDWLR DSWRAAYGPG TLSRMANAIT VAPPLDLTVK
DPDTREHWAR ALDATILPNG SLRRDTVGDV RALPGYREGA WWAQDAAAAI PATLLTLGPG
SSVIDLCAAP GGKTMQLAAT GADVTALDLS EKRLERVREN LGRTGLSATL VAGDALTYKP
AQPVDAVLLD APCTATGTLR RHPEAAWIKR ADDTGRMARL QDEMIKAAAA MLKPGGQLVL
CTCSLQPEEG EALAGRVAGR HRQLKESPIQ PDELAGVESA LTPAGWVRLT PALWAEQGGM
DGFFIARFTK RAG
|
|---|
| |